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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
KN539331.1_FGP002 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
bHLH |
Protein Properties |
Length: 412aa MW: 45484.2 Da PI: 6.9263 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
KN539331.1_FGP002 | genome | BGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 13.5 | 0.00014 | 47 | 95 | 5 | 55 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+ +r rrR +++ ++e Lr+l+P ++++ e L +A +YI +Lq
KN539331.1_FGP002 47 KEMRRRRRCVEVRRKMEALRRLVPGG--GGAGEDGGEELLFRAADYIAMLQ 95
55677777789**************5..49999***************998 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 412 aa
Download sequence Send
to blast |
MVAQATINNG RCDAAAAAAK SRPVVMPPAT ARSNHGAVAC KNSGSNKEMR RRRRCVEVRR 60 KMEALRRLVP GGGGAGEDGG EELLFRAADY IAMLQVQLQV HLPDKSIVQG RLRFMNRHYN 120 LSILEITSEL PLQVPAFGSA PKYGQEILAL SRDENMSLVA RRGAITWSDG SFMWRNHYMF 180 VDCDVPEGGE GGPVVGTGGS TIGMVYIDGP GAVIISISII CTFFEMWKQF RELDEQNWDG 240 ATKCAMILTL FTYFKKKPHE PQPELQVHLP DKSIVQGRLR FMNRHYNLSI LEITSELPLQ 300 VPAFGSAPKY GQEILALSRD ENMSLVARRG AITWSDGSLM WRNHYMFVDC DVPEGGEGGP 360 VVGTGGSTIG MVYIDGPGAV IISISIICTF FEMWKQFREL DEQNSAALMN SD
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK101218 | 0.0 | AK101218.1 Oryza sativa Japonica Group cDNA clone:J033031C13, full insert sequence. |