 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
KN539264.1_FGP002 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
MYB_related |
| Protein Properties |
Length: 160aa MW: 16817.5 Da PI: 4.286 |
| Description |
MYB_related family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| KN539264.1_FGP002 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 33.3 | 1.1e-10 | 15 | 43 | 1 | 29 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIar 29
+g+WT+eEd++l+ +++q+G g+W++ +
KN539264.1_FGP002 15 KGPWTPEEDQKLLSYIEQHGHGCWRSLPT 43
79**********************99876 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 160 aa
Download sequence Send
to blast |
MGRSPCCEKE AGLKKGPWTP EEDQKLLSYI EQHGHGCWRS LPTKAVQAVQ SSYGEACQEH 60
HFGGATAEAS FAGAGTLAGV LLDCSVTGAD QRFAARTEAC SGELQGEDDD DKGYWNSILN 120
MVNSSMSSSS SSLTSEVVTD TEMFLPATAA AAASATPVEF
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AP006161 | 0.0 | AP006161.3 Oryza sativa Japonica Group genomic DNA, chromosome 2, BAC clone:B1267B06. |
| GenBank | AP014958 | 0.0 | AP014958.1 Oryza sativa Japonica Group DNA, chromosome 2, cultivar: Nipponbare, complete sequence. |
| GenBank | CP012610 | 0.0 | CP012610.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 2 sequence. |
