 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
KN539246.1_FGP005 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
CPP |
| Protein Properties |
Length: 311aa MW: 35276.5 Da PI: 6.2424 |
| Description |
CPP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| KN539246.1_FGP005 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | TCR | 50.3 | 4.6e-16 | 107 | 143 | 3 | 39 |
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39
++gCnCkks+ClkkYC+C+++g+ Cs C+CedC+N
KN539246.1_FGP005 107 RRGCNCKKSSCLKKYCDCYQDGTGCSLFCRCEDCRNP 143
589********************************96 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 311 aa
Download sequence Send
to blast |
MEATPISVKP PSPAEGGGER GWERVQALRL QEVEMLEAFS VSYDSGKVYR HFSEKRGEEM 60
EMFGTMRFSQ LCASILSNIE AFAYAAIAHA LLVEEDAHHS SSSTPPRRGC NCKKSSCLKK 120
YCDCYQDGTG CSLFCRCEDC RNPFGKNEGI MAEESKRFLY TGADLDHSED EQDFIVERSP 180
RLQSPISKES SFQQTPPHIR ATNRDAHMFP QAISQWQPRS WHCSKRQSND RVIDDSGEYK 240
NSNHEWQLAK PEDSYSISRC VQILNGMAEL SQVEKSVAPD VFLQAGNREI FISLNGDVRA 300
LWLKRKIQNL T
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK108053 | 0.0 | AK108053.1 Oryza sativa Japonica Group cDNA clone:002-137-H05, full insert sequence. |
| Best hit in Arabidopsis thaliana ? help
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| Hit ID |
E-value |
Description |
| AT3G22760.1 | 7e-20 | Tesmin/TSO1-like CXC domain-containing protein |
