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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
KN539046.1_FGP017 |
| Organism |
|
| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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| Family |
MYB_related |
| Protein Properties |
Length: 245aa MW: 27500 Da PI: 4.3833 |
| Description |
MYB_related family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| KN539046.1_FGP017 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 47.3 | 4.7e-15 | 55 | 98 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
rg+WT +Ed+ lv++++ +G g+W++ ar g Rt++++k++w++
KN539046.1_FGP017 55 RGPWTVDEDLTLVNYIADHGEGRWNSLARAAG--RTDNEIKNYWRT 98
89*****************************8..**********96 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 245 aa
Download sequence Send
to blast |
MAASQRSRST AAQLDVDDQA AADQLMTMMR RPAAALQDEA AAEEEAADLQ LELRRGPWTV 60
DEDLTLVNYI ADHGEGRWNS LARAAGRTDN EIKNYWRTRV QKHAKQLNCD ANSARFKDAM 120
RYLWMPRLAD ASQLGDHHGY NGTTAMGDAH GMPVMTSSSS DSFATSESYD GGLYANVQDN 180
EMVNGGDYYW MQGANQGFCS NYESEQQLHP HEHSQFQDPD LVGWVQGFSE GISENFWSLE 240
DIWKM
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| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor that may be involved in the jasmonate-dependent defense responses to the rice blast fungus Magnaporthe oryzae. Does not seem to function in the salicylic acid-dependent signaling pathway. {ECO:0000269|PubMed:11310740}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by jasmonate (JA), wounding and infection by the fungal pathogen Magnaporthe oryzae. {ECO:0000269|PubMed:11310740}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AL928753 | 0.0 | AL928753.3 Oryza sativa chromosome 12, . BAC OSJNBb0076G11 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence. |
| GenBank | AP014968 | 0.0 | AP014968.1 Oryza sativa Japonica Group DNA, chromosome 12, cultivar: Nipponbare, complete sequence. |
| GenBank | CU406184 | 0.0 | CU406184.1 Oryza rufipogon (W1943) cDNA clone: ORW1943C108M20, full insert sequence. |
| Publications
? help Back to Top |
- Ahn IP,Kim S,Kang S,Suh SC,Lee YH
Rice Defense Mechanisms Against Cochliobolus miyabeanus and Magnaporthe grisea Are Distinct.
Phytopathology, 2005. 95(11): p. 1248-55
[PMID:18943354] - Campos-Soriano L,García-Martínez J,San Segundo B
The arbuscular mycorrhizal symbiosis promotes the systemic induction of regulatory defence-related genes in rice leaves and confers resistance to pathogen infection.
Mol. Plant Pathol., 2012. 13(6): p. 579-92
[PMID:22212404] - Yokotani N, et al.
Role of the rice transcription factor JAmyb in abiotic stress response.
J. Plant Res., 2013. 126(1): p. 131-9
[PMID:22847900] - Wang D, et al.
Expression analysis of innate immunity related genes in the true/field blast resistance gene-mediated defence response.
Biotechnol. Biotechnol. Equip., 2014. 28(6): p. 999-1007
[PMID:26740780] - Fred AK,Kiswara G,Yi G,Kim KM
Screening Rice Cultivars for Resistance to Bacterial Leaf Blight.
J. Microbiol. Biotechnol., 2016. 26(5): p. 938-45
[PMID:26869604]
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