 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
KN538986.1_FGP027 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
MYB_related |
| Protein Properties |
Length: 473aa MW: 52319.5 Da PI: 9.6378 |
| Description |
MYB_related family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| KN538986.1_FGP027 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 25.7 | 2.7e-08 | 84 | 122 | 1 | 41 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqck 41
r +WT E++++++a +++ + Wk+I +++g +t q++
KN538986.1_FGP027 84 RESWTDPEHDKFLEALQLFDRD-WKKIEAYVG-SKTVIQLV 122
789*****************77.*********.99998875 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 473 aa
Download sequence Send
to blast |
MGGKSEVNQE RMDVETLGAR QPPDKASSRA EHPNPNPSLR LRLSEIAGMS SAPQQLLDSS 60
SPGPEVEDDG GRRVRKPYTI TKSRESWTDP EHDKFLEALQ LFDRDWKKIE AYVGSKTVIQ 120
LVAFVTEYFR VLQFLNLPGG DLIINLGVLA APQVVLPQQA SHLMEQGCLI PMDISPVARN 180
FNANDVFSSW DNALAQSFSP RHTHGAANNC SSSVESQSGT CPTSEAIEQE FMLPTLRAMP 240
DFSQVYNFLG SIFDPETSGH LQRLREMDPI DVETWWIPVI TCGLDNLDIV LLLMKNLSIN 300
LSNPNFEAHH MACKKLSKIK SSRNSVVCTL SFCLEARKEK KIGRIKKKKK KKKKKKKKKK 360
KRLVAMVQGA SGGGWSSKVE EGVIVGGLLV TQCILAGYVV FVDHVLSLGA NPLSLIVLGA 420
VASSLFFLPF AVVLERKKWP SKISRTLMAQ FVFIALGGSM SIEQNTVREA RAN
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 347 | 361 | KKKKKKKKKKKKKKR |
| 2 | 348 | 361 | KKKKKKKKKKKKKR |
| 3 | 350 | 362 | KKKKKKKKKKKRL |
| 4 | 351 | 360 | KKKKKKKKKK |
| 5 | 353 | 361 | KKKKKKKKR |
| 6 | 355 | 361 | KKKKKKR |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK111672 | 0.0 | AK111672.1 Oryza sativa Japonica Group cDNA clone:J013156D15, full insert sequence. |
| GenBank | AK119640 | 0.0 | AK119640.1 Oryza sativa Japonica Group cDNA clone:002-130-F07, full insert sequence. |
