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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
KN538928.1_FGP024 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
bHLH |
Protein Properties |
Length: 90aa MW: 10239.9 Da PI: 11.3325 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
KN538928.1_FGP024 | genome | BGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 22.7 | 1.8e-07 | 44 | 84 | 9 | 54 |
HHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
HLH 9 ErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
r RR+r+ +++ L++l+P + K++ a++L +A Y+k L
KN538928.1_FGP024 44 ARLRRERVSDRLRVLQKLVPGgN------KMDTASMLDEAASYLKFL 84
599*****************955......****************98 PP
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 25 | 31 | DKPRRKN |
2 | 26 | 31 | KPRRKN |
3 | 44 | 49 | RLRRER |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor involved in the negative regulation of flowering. May be involved in the repression of the flowering factor GI and HD1 by interacting with PIL13 and PIL15 and competing with PRR1. Possesses transactivation activity in yeast. {ECO:0000269|PubMed:21549224}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK100208 | 1e-142 | AK100208.1 Oryza sativa Japonica Group cDNA clone:J023042H10, full insert sequence. |
GenBank | AK106119 | 1e-142 | AK106119.1 Oryza sativa Japonica Group cDNA clone:001-207-E08, full insert sequence. |
GenBank | AP003273 | 1e-142 | AP003273.3 Oryza sativa Japonica Group genomic DNA, chromosome 1, PAC clone:P0510F09. |
GenBank | AP003381 | 1e-142 | AP003381.3 Oryza sativa Japonica Group genomic DNA, chromosome 1, PAC clone:P0692C11. |
GenBank | AP014957 | 1e-142 | AP014957.1 Oryza sativa Japonica Group DNA, chromosome 1, cultivar: Nipponbare, complete sequence. |