 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
KN538910.1_FGP016 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
MYB_related |
| Protein Properties |
Length: 260aa MW: 28390.2 Da PI: 11.2318 |
| Description |
MYB_related family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| KN538910.1_FGP016 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 46.1 | 1.2e-14 | 19 | 63 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
+WT+eE++l++ + k++G g+W+ I+r + + Rt+ q+ s+ qky
KN538910.1_FGP016 19 PWTEEEHKLFLMGLKKYGRGDWRNISRNFVTSRTPTQVASHAQKY 63
8*******************************************9 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 260 aa
Download sequence Send
to blast |
MVGGKRARGP DQERKKGVPW TEEEHKLFLM GLKKYGRGDW RNISRNFVTS RTPTQVASHA 60
QKYFIRLNSG GKDKRRSSIH DITTVNLPDD DHGNPSPSPP PSVLTAHSSS SAAAVSEQFG 120
VLVDGKPPPP PPLGRGAGHH HFMPHPYAQP TETPMEGNNG APHHHKKGGH GKTVFAAVAG 180
FHLAQHLQLA PGCLHAQIHP QGKCHWWLTA RHRGKRREGN RRQLRWLPLG ASLGLAQRPC 240
ASVKKRGDAS LERVNKGGAG
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AK068138 | 0.0 | AK068138.1 Oryza sativa Japonica Group cDNA clone:J013135D01, full insert sequence. |
