 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
KN538904.1_FGP007 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
GRAS |
| Protein Properties |
Length: 302aa MW: 32823.3 Da PI: 5.0501 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| KN538904.1_FGP007 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 151.6 | 7.3e-47 | 2 | 195 | 2 | 187 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn....sseelaalkl..fsev 87
++lL++cA+a++++d++l+q++L+ l+++a dgd++qRl+a f+ AL +r +r ++ +ka+++ ++ + ++++++a++l f ++
KN538904.1_FGP007 2 EQLLVHCANAIEANDATLTQQILWVLNNIAPADGDSNQRLTAAFLCALVSRASR--TGACKAVTAAVADAVEsaalHVHRFTAVELasFIDL 91
79***************************************************9..44454443333322221234666666666689**** PP
GRAS 88 sPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg....skeeleetgerLakfAeelgvp 175
+P+++f++ +aN aI+eaveg vHi+D++ ++++Q p+L++ La+R+egpp lR+T+ + + s +ee+g +L +fA++ +++
KN538904.1_FGP007 92 TPWHRFGYTAANAAIVEAVEGFPVVHIVDLGTTHCMQIPTLIDMLAARAEGPPILRLTVADVAPSApppaLDMPYEELGAKLVNFARSRNMS 183
***********************************************************9886666787777789***************** PP
GRAS 176 fefnvlvakrle 187
++f+v+ ++ +
KN538904.1_FGP007 184 MDFRVVPTSPAD 195
****98555444 PP
|
| 2 | GRAS | 69.6 | 6.2e-22 | 205 | 299 | 277 | 373 |
GRAS 277 reseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLv 368
r se+r+++E+e +g++++nv+a+eg er+er+e ++W +r+++aGF++++++e+aa ++k++l+ ++ g+ ++ e++ lvl+Wk++++v
KN538904.1_FGP007 205 RGSEQRRWYEAE-VGWKVENVLAQEGVERVERQEDRARWGQRMRAAGFRAAAFGEEAAGEVKAMLNDHA-AGWGMKREDDDLVLTWKGHNVV 294
788*********.********************************************************.889999**************** PP
GRAS 369 svSaW 373
++SaW
KN538904.1_FGP007 295 FASAW 299
***** PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 302 aa
Download sequence Send
to blast |
MEQLLVHCAN AIEANDATLT QQILWVLNNI APADGDSNQR LTAAFLCALV SRASRTGACK 60
AVTAAVADAV ESAALHVHRF TAVELASFID LTPWHRFGYT AANAAIVEAV EGFPVVHIVD 120
LGTTHCMQIP TLIDMLAARA EGPPILRLTV ADVAPSAPPP ALDMPYEELG AKLVNFARSR 180
NMSMDFRVVP TSPADALTSL VDQLRGSEQR RWYEAEVGWK VENVLAQEGV ERVERQEDRA 240
RWGQRMRAAG FRAAAFGEEA AGEVKAMLND HAAGWGMKRE DDDLVLTWKG HNVVFASAWA 300
PS
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | CP012615 | 0.0 | CP012615.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 7 sequence. |
