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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
KN538886.1_FGP018 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
bHLH |
Protein Properties |
Length: 341aa MW: 37013.1 Da PI: 5.9149 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
KN538886.1_FGP018 | genome | BGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 27.5 | 5.7e-09 | 192 | 239 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+h+ +Er RR++i +++ L++l+P + +k Ka +L + + Y++sLq
KN538886.1_FGP018 192 SHSLAERVRREKISERMKMLQSLVPGC----DKVTGKALMLDEIISYVQSLQ 239
8*************************9....555*****************9 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 341 aa
Download sequence Send
to blast |
MESLCGQLEH EHEQQLHQSS SSSLLPYCFL SAPEPLPVPG FPAGCSNLEE KAAAAMAAYE 60 YESSSCSSLD PTSMPMVYSP IVLQPQECPL SFDFDNAAAA AAAGDNKWVP GIQGSCPCSL 120 GSTQDMDASW GKSRKHKRSS VDLKGLEEKK ARRVVLHQHD DDVKKKAKEA AGGEPPAGYI 180 HVRARRGQAT DSHSLAERVR REKISERMKM LQSLVPGCDK VTGKALMLDE IISYVQSLQN 240 QVEFLSMKLA SLSPMMYEFG PGIDMYPDVL PQLAKMPHEM VQCMGQMGST GISLQGLGGG 300 PTGFAQDGSS HMNMVVMQVG EQGQQQGSLH QVEMSSHCFF Q
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK065864 | 0.0 | AK065864.1 Oryza sativa Japonica Group cDNA clone:J013044E05, full insert sequence. |
GenBank | HQ858853 | 0.0 | HQ858853.1 Oryza sativa Japonica Group isolate UT1616 bHLH transcription factor mRNA, partial cds. |