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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
KN538834.1_FGP009 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
bHLH |
Protein Properties |
Length: 242aa MW: 24479.3 Da PI: 5.639 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
KN538834.1_FGP009 | genome | BGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 28.2 | 3.4e-09 | 61 | 100 | 11 | 55 |
HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
RR+ri +++ L+el+P+a K +Ka++L + ++Y+k Lq
KN538834.1_FGP009 61 LRRERIAERMKALQELVPNA-----NKTDKASMLDEIIDYVKFLQ 100
6******************8.....6******************9 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 242 aa
Download sequence Send
to blast |
MQPNARQMHG GGGRGGGGQD DFFDQMLSTL PAGGDHALYN GFGAAGMHGA AAMQPPPFGQ 60 LRRERIAERM KALQELVPNA NKTDKASMLD EIIDYVKFLQ LQVKVLSMSR LGGASAVAPL 120 VANMSSESNG NGNATSSSGN GEAANGSSNS DNNGGGTLRV TEQQVAKLME EDMGSAMQYL 180 QGKGLCLMPI SLATAISSAT SSLLLPRTGG GAGGSLHEGG NGTSPPLVNG AATGGDDAGG 240 KQ
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Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Repressed by heat treatment. {ECO:0000269|PubMed:12679534}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP003975 | 1e-173 | AP003975.3 Oryza sativa Japonica Group genomic DNA, chromosome 2, BAC clone:OJ1004_E04. |
GenBank | AP004094 | 1e-173 | AP004094.3 Oryza sativa Japonica Group genomic DNA, chromosome 2, BAC clone:OJ1695_H09. |
GenBank | AP014958 | 1e-173 | AP014958.1 Oryza sativa Japonica Group DNA, chromosome 2, cultivar: Nipponbare, complete sequence. |