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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
KN538826.1_FGP062 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
bHLH |
Protein Properties |
Length: 304aa MW: 33190.6 Da PI: 9.0042 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
KN538826.1_FGP062 | genome | BGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 14.9 | 4.9e-05 | 234 | 272 | 12 | 55 |
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
R +++ ++++ L++l+ + +K + a++L +A+ YIk Lq
KN538826.1_FGP062 234 RKEKLGDRIAALQQLVSPF-----GKTDTASVLMEAIGYIKFLQ 272
7788899*********998.....8******************9 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 304 aa
Download sequence Send
to blast |
MASSSSSSSL CDNHLLQEDL IPWPSMPFAP APNTFGLNHQ WSQPPMLSSS TDQLSSYELE 60 SLQSVESQLA AAAPPTLSPH LQAHQLSTVL MMQELGFQWS SCAAPADQHS IASSTNNNSN 120 VMMNEEELRP RPDQSLISNP SSIRDEHVPC PYAGPPAHLI QGPSNTLQLL RVTCVIFLPQ 180 KVLMKRNTNA AAQGRGGRHG SSTEHRSSTA LPPSSKKPRL ESHSSSMLPS FKVRKEKLGD 240 RIAALQQLVS PFGKTDTASV LMEAIGYIKF LQDQVETLSG PYLRSSKNSK KLACRAAQQQ 300 RVKR
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK119493 | 0.0 | AK119493.1 Oryza sativa Japonica Group cDNA clone:001-134-D09, full insert sequence. |