 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
KN538806.1_FGP013 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
C2H2 |
| Protein Properties |
Length: 217aa MW: 23162.9 Da PI: 6.1036 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| KN538806.1_FGP013 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 12.7 | 0.0004 | 163 | 179 | 1 | 17 |
EEETTTTEEESSHHHHH CS
zf-C2H2 1 ykCpdCgksFsrksnLk 17
++Cp C k+F+r nL+
KN538806.1_FGP013 163 FSCPVCRKTFNRYNNLQ 179
89**********99997 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 217 aa
Download sequence Send
to blast |
MEDAQTNLMI SRGHGHGHHH HQPELMKEFP FLSLISSASS CISSSGHQQQ QQQQDDDGHG 60
GHDRHQLLRY GCCSGNKQQE EEEEEVTVAL RIGLPAVSSP SPAMANHGAS ASSTGVAGDD 120
GGGGAMAGVG VEVESVRRSG GGGGGGQYWI PTAAQILAGA TQFSCPVCRK TFNRYNNLQC 180
AYGKCMGFEL RLDLLIRTMF DIAMTIVIIA YCEIIQT
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AP004184 | 0.0 | AP004184.3 Oryza sativa Japonica Group genomic DNA, chromosome 2, BAC clone:OJ1225_F07. |
| GenBank | AP004191 | 0.0 | AP004191.3 Oryza sativa Japonica Group genomic DNA, chromosome 2, BAC clone:OJ1524_D08. |
| GenBank | AP014958 | 0.0 | AP014958.1 Oryza sativa Japonica Group DNA, chromosome 2, cultivar: Nipponbare, complete sequence. |
| GenBank | CP012610 | 0.0 | CP012610.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 2 sequence. |
