 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
KN538720.1_FGP049 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
bZIP |
| Protein Properties |
Length: 353aa MW: 39164.2 Da PI: 9.8351 |
| Description |
bZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| KN538720.1_FGP049 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | bZIP_1 | 23.8 | 9.7e-08 | 178 | 211 | 17 | 50 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50
A+rsR RK+++i+eLe++v++L++e + e++
KN538720.1_FGP049 178 AQRSRVRKLQYIAELERRVQALQTEGVEVSAEMD 211
99*********************99877766666 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 353 aa
Download sequence Send
to blast |
MYDNVFDGMR GRGGGGQQVG SWGGVPEFFP EQSSFGRPQG QGGRPWDSRL MLRQGGGGGG 60
GGGMPVPMRE MNGGHHGPPS AFGDHGHGSL PNGLDRKGPG DSPHDQRIGA ERKEGAHLRH 120
SQSEADTKRA KHYFGSSLIV LLTCDSRFNV KEFCWYILNI MSYAFNKLLP TTHFRQYAQR 180
SRVRKLQYIA ELERRVQALQ TEGVEVSAEM DFLGQQNIML DLENKALKQR LESLSQEHLI 240
KRFFVSFVIS NPHYYTPRVA SNSSAAGTQG HEQNVRSVEI NSVTSWRTDC SAEIEPLQCQ 300
MSPLHAGTSP SNPAKSLSEH PLLGLLPTYT SYIRKASKIK HLLKAMVQKS FKL
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AK287555 | 1e-159 | AK287555.1 Oryza sativa Japonica Group cDNA, clone: J065019F14, full insert sequence. |
| GenBank | AK287716 | 1e-159 | AK287716.1 Oryza sativa Japonica Group cDNA, clone: J065134G21, full insert sequence. |
| GenBank | AL713953 | 1e-159 | AL713953.3 Oryza sativa chromosome 12, . BAC OJ1134_A05 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence. |
| GenBank | AP014968 | 1e-159 | AP014968.1 Oryza sativa Japonica Group DNA, chromosome 12, cultivar: Nipponbare, complete sequence. |
| GenBank | BX536967 | 1e-159 | BX536967.2 Oryza sativa chromosome 12, . BAC OSJNBa0029N15 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence. |
| GenBank | CP012620 | 1e-159 | CP012620.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 12 sequence. |
