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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
KN538719.1_FGP045 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
bHLH |
Protein Properties |
Length: 311aa MW: 33342.8 Da PI: 8.4863 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
KN538719.1_FGP045 | genome | BGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 28.6 | 2.5e-09 | 113 | 160 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+h+ +Er RR+ri +++ L+el+P + +k Ka +L + ++Y++sLq
KN538719.1_FGP045 113 SHSLAERVRRERISERMRYLQELVPGC----NKVTGKAGMLDEIINYVQSLQ 160
8*************************9....677*****************9 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006351 | Biological Process | transcription, DNA-templated |
GO:0009637 | Biological Process | response to blue light |
GO:0009911 | Biological Process | positive regulation of flower development |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 311 aa
Download sequence Send
to blast |
MAQCGGGDVS RHRKGHLDTV ESLCQGLLDD GESNSVCKRR RGKQQQQQQP CHPDQMAAAV 60 GKGRPERARP GAKKKAEVAS PKDSPATSAS TVTAGQKTDY IHVRARRGQA TDSHSLAERV 120 RRERISERMR YLQELVPGCN KVTGKAGMLD EIINYVQSLQ KQVEFLSMKI AASNPVVNFN 180 IVEDLFGRQL SQAACNPAAL PAMALPMAQV EPSCLQMSPL QQMQASAGSS GYGLEMVVSN 240 QYSPPGGPMS VPAGASVEPC LNVNGAAGWD IGSHGLFSGF DAPFQSVQSD CLLDNLKMEM 300 SRSKKASDLS I
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK119183 | 0.0 | AK119183.1 Oryza sativa Japonica Group cDNA clone:001-038-D03, full insert sequence. |