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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
KN538712.1_FGP102 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
GRAS |
Protein Properties |
Length: 468aa MW: 51824 Da PI: 4.4372 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
KN538712.1_FGP102 | genome | BGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 162.5 | 3.6e-50 | 48 | 387 | 2 | 354 |
GRAS 2 velLlecAeavssgdlelaqalLarlsel.....aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevs 88
+lLl+ Aeav++gd la+ + +rl + + +++++ Rla +f ++L++r+++ ++++y+ p++ + s ++ ++++ ++
KN538712.1_FGP102 48 SDLLLAGAEAVEAGDSILASVAFSRLDDFlsgipENGAASSFDRLAYHFDQGLRSRMSSASTGCYQ---PEPLP----SGNMLVHQIIQD-- 130
679***********************998554333334479******************9999994...44444....233444455555.. PP
GRAS 89 PilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnv 180
+kf+h+t+NqaIl+a+ g+ vH++D++i++G+QW +L+ La g s+R+T++ + + + ++ + L++fA++l++pf++n
KN538712.1_FGP102 131 --VKFAHFTTNQAILDAIIGDMDVHVVDLNIGEGIQWSSLMSDLAR--CGGKSFRLTAITTYADCNPSTHDTVVRLLSEFADSLELPFQYNS 218
..6******************************************7..4668*********7777888899999999*************** PP
GRAS 181 lvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqe.......adhnsesFlerflealeyys 265
+ +++ + el+++ + + +++V++ ++ ++s+ + + +L +vk+l+Pk+vv +e++ a+ +s+sF+e f+eal++++
KN538712.1_FGP102 219 ICVHDED--ELHAFFEDCKGSVIVSCDTTSMYYK--PLSTLQ--SLLLVCVKKLQPKLVVTIEEDlvrigrgASPSSASFVEFFFEALHHFT 304
8666444..45778777799******99776665..666555..79*******************7665553344666************** PP
GRAS 266 alfdsleaklpres..eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveee 354
++f+s+++ + + + vE ellg++i++ v + g+ r+e + +e l GF + +ls + +qa++l+ ++ + + v +
KN538712.1_FGP102 305 TVFESMASCFIGSNyePCLRLVEMELLGPRIQDFVVKYGSVRVEANA-----SEVL--EGFMACELSACNIAQARMLVGLFN-RVFGVVFK 387
******66655444478899*********************999888.....5555..5********************999.44555544 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 468 aa
Download sequence Send
to blast |
MVLDSNELHQ HDAPDVDVSI NCDDRIFGQE SVNLAAIQEE LLEEDSLSDL LLAGAEAVEA 60 GDSILASVAF SRLDDFLSGI PENGAASSFD RLAYHFDQGL RSRMSSASTG CYQPEPLPSG 120 NMLVHQIIQD VKFAHFTTNQ AILDAIIGDM DVHVVDLNIG EGIQWSSLMS DLARCGGKSF 180 RLTAITTYAD CNPSTHDTVV RLLSEFADSL ELPFQYNSIC VHDEDELHAF FEDCKGSVIV 240 SCDTTSMYYK PLSTLQSLLL VCVKKLQPKL VVTIEEDLVR IGRGASPSSA SFVEFFFEAL 300 HHFTTVFESM ASCFIGSNYE PCLRLVEMEL LGPRIQDFVV KYGSVRVEAN ASEVLEGFMA 360 CELSACNIAQ ARMLVGLFNR VFGVVFKKIS LLMVYCIFLG KNDLREPNKV IWSSLAAGCG 420 SHGIVVLAFY AADKLLEFKP KGIETYIHPA VERAHFHKED IMWQEYEN
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC120534 | 0.0 | AC120534.5 Oryza sativa Japonica Group cultivar Nipponbare chromosome 11 clone OSJNBa0084A20, complete sequence. |
GenBank | AP014967 | 0.0 | AP014967.1 Oryza sativa Japonica Group DNA, chromosome 11, cultivar: Nipponbare, complete sequence. |
GenBank | CP012619 | 0.0 | CP012619.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 11 sequence. |