PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KN538686.1_FGP163
Organism
Oryza longistaminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 923aa    MW: 104056 Da    PI: 5.7262
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KN538686.1_FGP163genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_122.42.6e-076385426
                       XCHHHCHHHHHHHHHHHHHHHHH CS
             bZIP_1  4 lkrerrkqkNReAArrsRqRKka 26
                        k+ rr+++NReAAr+sR+RKk 
  KN538686.1_FGP163 63 QKVLRRLAQNREAARKSRLRKKH 85
                       5899*****************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.4E-560129No hitNo description
PROSITE patternPS0003606782IPR004827Basic-leucine zipper domain
PfamPF141442.1E-32168243IPR025422Transcription factor TGA like domain
SuperFamilySSF517352.36E-48446635IPR016040NAD(P)-binding domain
Gene3DG3DSA:3.40.50.7201.0E-60448631IPR016040NAD(P)-binding domain
HamapMF_0096674.259449921IPR001282Glucose-6-phosphate dehydrogenase
TIGRFAMsTIGR008712.6E-135450918IPR001282Glucose-6-phosphate dehydrogenase
PfamPF004797.9E-46454632IPR022674Glucose-6-phosphate dehydrogenase, NAD-binding
PRINTSPR000791.2E-38588601IPR001282Glucose-6-phosphate dehydrogenase
PRINTSPR000791.2E-38612640IPR001282Glucose-6-phosphate dehydrogenase
SuperFamilySSF553472.19E-86622918No hitNo description
Gene3DG3DSA:3.30.360.101.0E-100632918No hitNo description
PfamPF027811.0E-88635917IPR022675Glucose-6-phosphate dehydrogenase, C-terminal
PRINTSPR000791.2E-38664681IPR001282Glucose-6-phosphate dehydrogenase
PRINTSPR000791.2E-38682698IPR001282Glucose-6-phosphate dehydrogenase
PRINTSPR000791.2E-38759785IPR001282Glucose-6-phosphate dehydrogenase
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006006Biological Processglucose metabolic process
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0055114Biological Processoxidation-reduction process
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0004345Molecular Functionglucose-6-phosphate dehydrogenase activity
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0050661Molecular FunctionNADP binding
Sequence ? help Back to Top
Protein Sequence    Length: 923 aa     Download sequence    Send to blast
MADASSRTDT STVLDTDDKN QMAHHFDINF VKNLIIKVDG QSGAIVPSNS SDRSDRSDKP  60
MDQKVLRRLA QNREAARKSR LRKKHLNCLF FLSFYDIMGI TKEFQKAYVQ QLESSKLKLA  120
SLEQEINKAR QQGIYISSSG DQTHAMSGNG AMTFDLEYAR WLEEQNKQIN ELRTAVNAHA  180
SDSDLRLIVD GIMAHYDEIF RLKGVAAKAD VFHILSGMWK TPAERCFLWL GGFRSSELLK  240
LLVNQLEPLT EQQLLGLSNL QQSSQQAEDA LSQGMEALQQ SLADTLAGSL GPSGSSGNVA  300
NYMGQMAMAM GKLGTLENFL RQCAQVAGPA ANFRTRVCGL RCLIAAKLKF RKTLKRHGWQ  360
LRRNLEVRAN DKVPDWLEAT PLTENIMSRD VQLAYDSGGE TSNTCPDTLD SSVIEQSSMH  420
HKLNPPETHP PVLKEDPVLF DDPPESAAPL CIAVIGATGE LAKNKVFPAL FALYYSGFLP  480
QNVGIFGYSR KTLIDEDLRS MIEANLTCRV DHHENCDEKL NEFLKRTYYI DAGYDNKDGM  540
VKLNSRMSQI EGNCAANRIF YLAVPQEALL DVALSLADSA QTTQGWNRII IEKPFGFTGL  600
SSHRVTQSLL SRFEEEQIYR IDHLLGKDLI ENLTVLRFSN LVFEPLWSRT YIRNVQVIFS  660
EETAAEIQGR YFGNYGIIRD IVHSHILQTI ALFAMEPPVS LDGEDIRDEK VKVLRSIRQV  720
NLEDVVLGQL KDTSVKVDRY TKSLTPTYFA AAMYIDNSRW DGVPFLIKTG IGLMENRAEI  780
RIQFRHVPGN IYRERFGHDI DLDTNELILR DQPEEAILLK VNNKVPGLGL QLDASELNLL  840
YRDRYNVELP DSYEHLLLDV LDGDSHLFMR SDEVAAAWNV LTPLIHEIDQ NRIAPELYEA  900
GGRGPVNAYY LAAKHGVRLD DEW
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2bh9_A1e-11945492010478GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE
2bhl_A1e-11945492010478GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE
2bhl_B1e-11945492010478GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE
5ukw_A1e-11945492013481Glucose-6-phosphate 1-dehydrogenase
6e08_L1e-11945492336507Glucose-6-phosphate 1-dehydrogenase
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtSeems to be a catalytically inactive enzyme. {ECO:0000269|PubMed:21309870}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapKN538686.1_FGP163
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK1219670.0AK121967.1 Oryza sativa Japonica Group cDNA clone:J033108F18, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025879520.10.0glucose-6-phosphate 1-dehydrogenase 4, chloroplastic
SwissprotQ93ZW00.0G6PD4_ARATH; Inactive glucose-6-phosphate 1-dehydrogenase 4, chloroplastic
TrEMBLA0A0E0CZR50.0A0A0E0CZR5_9ORYZ; Glucose-6-phosphate 1-dehydrogenase
STRINGEMT038920.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP103122
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.41e-106TGACG motif-binding factor 6
Publications ? help Back to Top
  1. Wakao S,Benning C
    Genome-wide analysis of glucose-6-phosphate dehydrogenases in Arabidopsis.
    Plant J., 2005. 41(2): p. 243-56
    [PMID:15634201]
  2. Meyer T,Hölscher C,Schwöppe C,von Schaewen A
    Alternative targeting of Arabidopsis plastidic glucose-6-phosphate dehydrogenase G6PD1 involves cysteine-dependent interaction with G6PD4 in the cytosol.
    Plant J., 2011. 66(5): p. 745-58
    [PMID:21309870]