PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja

Family

bZIP

Protein Properties

Length: 168aa MW: 19042.3 Da PI: 4.985

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
KHN47985.1	genome	TCUHK	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	44.7	2.8e-14	32	90	5	63
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 ++ +r+ +NRe+ArrsR RK++ +e L ++L++eN+++ ++ ++++ ++++e+ KHN47985.1 32 RKRKRMLSNRESARRSRMRKQQHLEGLSAQLDQLKKENTQMNTNIGISTQLYLNVEAEN 90 7889****************************************999999988887776 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	9.3E-17	28	92	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.404	30	76	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	1.9E-10	31	78	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	1.5E-10	32	75	No hit	No description
SuperFamily	SSF57959	9.85E-12	32	84	No hit	No description
CDD	cd14702	2.40E-17	33	83	No hit	No description
PROSITE pattern	PS00036	0	35	50	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0000165	Biological Process	MAPK cascade
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005622	Cellular Component	intracellular
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0004707	Molecular Function	MAP kinase activity
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 168 aa Download sequence Send to blast
MASPGGSGTY SSGSSSLQNS GSEGDRDIME QRKRKRMLSN RESARRSRMR KQQHLEGLSA 60 QLDQLKKENT QMNTNIGIST QLYLNVEAEN AILRAQMEEL SKRLNSLNEM ISLINSTTTT 120 NNCLMFDEAQ ETTTQLFNDC GFMDAWNYGI PLNQQIMAYA DNDMLMMY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	44	51	RRSRMRKQ

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription factor that binds to the DNA G-box motif 5'-CACGTG-3' of MAN7 promoter. Involved in the positive regulation of seed germination through MAN7 gene activation. MAN7 is required for both, loosening of the micropylar endosperm, and rupture of the seed coat in germinating seeds. {ECO:0000269\|PubMed:23461773}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	KHN47985.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	KT031137	0.0	KT031137.1 Glycine max clone HN_CCL_138 BZIP transcription factor (Glyma08g12170.1) mRNA, partial cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	NP_001237147.1	1e-121	bZIP transcription factor bZIP110
Refseq	XP_028243564.1	1e-121	bZIP transcription factor 11-like
Swissprot	C0Z2L5	3e-37	BZP44_ARATH; bZIP transcription factor 44
TrEMBL	A0A0R0IKI9	1e-120	A0A0R0IKI9_SOYBN; Uncharacterized protein
TrEMBL	A0A445JD95	1e-120	A0A445JD95_GLYSO; BZIP transcription factor 44
TrEMBL	Q0GPG3	1e-120	Q0GPG3_SOYBN; BZIP transcription factor bZIP110
STRING	GLYMA08G12170.1	1e-121	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF613	34	147

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G34590.1	8e-36	G-box binding factor 6

Publications ? help Back to Top
Qi X, et al. Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing. Nat Commun, 2014. 5: p. 4340 [PMID:25004933] Ezer D, et al. The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470] Pedrotti L, et al. Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness. Plant Cell, 2018. 30(2): p. 495-509 [PMID:29348240]