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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
KHN47210.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
|
| Family |
VOZ |
| Protein Properties |
Length: 478aa MW: 53316.8 Da PI: 6.001 |
| Description |
VOZ family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| KHN47210.1 | genome | TCUHK | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | VOZ | 445 | 9.1e-137 | 201 | 417 | 1 | 217 |
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaaelfdls 99
pppsaflgpkcalwdc+rpaqg +w+qdycssfha+lalneg+pg++pvlrp+gi+lkd+llfaalsak+qgk+vgipecegaatakspwna+elfdls
KHN47210.1 201 PPPSAFLGPKCALWDCPRPAQGLDWCQDYCSSFHAALALNEGPPGMAPVLRPGGIGLKDNLLFAALSAKAQGKDVGIPECEGAATAKSPWNAPELFDLS 299
89************************************************************************************************* PP
VOZ 100 llegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklvdekksakg 198
+legetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvm+efgglkrsyymdpqp+++fewhlyeyei+++da+alyrlelklvd+kk++k+
KHN47210.1 300 VLEGETIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMNEFGGLKRSYYMDPQPLNHFEWHLYEYEISKCDACALYRLELKLVDGKKNSKT 398
*************************************************************************************************** PP
VOZ 199 kvskdsladlqkklgrlta 217
k ++ds+adlqk++grl+a
KHN47210.1 399 KAANDSVADLQKQMGRLSA 417
*****************97 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 478 aa
Download sequence Send
to blast |
MKKVPKNSCK SASHRLFKDK AKNRVDDLQL MFLDLQFARK ESRTVDAAVL EEQVHQMLRE 60
WKAELNEPSP ASSLQQGGSL GSFSTDICRL LQLCEEEDDA SSQLAAPKPE PNDQTLQVGG 120
KVMFQEGQQQ HDFPFVDECK HFTSSVQNVA ANNPDGHDLE YHQFDLHQDY DHGLYTGFNG 180
TGYCEEDAIP HISSYLPSIC PPPSAFLGPK CALWDCPRPA QGLDWCQDYC SSFHAALALN 240
EGPPGMAPVL RPGGIGLKDN LLFAALSAKA QGKDVGIPEC EGAATAKSPW NAPELFDLSV 300
LEGETIREWL FFDKPRRAFE SGNRKQRSLP DYSGRGWHES RKQVMNEFGG LKRSYYMDPQ 360
PLNHFEWHLY EYEISKCDAC ALYRLELKLV DGKKNSKTKA ANDSVADLQK QMGRLSAEFP 420
HDNKRAAKGR AKINTKVGIG GGVYSASHRV TPLNGTYEYG LAAPYDYLVD NMGDYYGT
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By far-red light. {ECO:0000269|PubMed:22904146}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AC166092 | 0.0 | AC166092.4 Glycine max cultivar Williams 82 clone gmw1-93l19, complete sequence. |
| Publications
? help Back to Top |
- Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
BMC Plant Biol., 2013. 13: p. 229
[PMID:24377444] - Qi X, et al.
Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
Nat Commun, 2014. 5: p. 4340
[PMID:25004933] - Yasui Y,Kohchi T
VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis.
Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5
[PMID:25351333] - Kumar S,Choudhary P,Gupta M,Nath U
VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition.
Plant Physiol., 2018. 176(4): p. 2917-2930
[PMID:29507119] - Song C,Lee J,Kim T,Hong JC,Lim CO
VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis.
Planta, 2018. 247(6): p. 1439-1448
[PMID:29536220]
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