PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN45946.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bZIP
Protein Properties Length: 184aa    MW: 20630.2 Da    PI: 8.6289
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN45946.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_142.91.1e-13110159453
                 XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 
                 ++r  r +kNRe+A rsR+RK+a+ + Le +++ L++eN++Lk +l+el+
  KHN45946.1 110 DQRHARIIKNRESAVRSRARKQAYRKGLEVEIARLTEENSRLKRQLKELQ 159
                 578999*************************************9999885 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.3E-10107171IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.254109159IPR004827Basic-leucine zipper domain
CDDcd147078.99E-24111165No hitNo description
PfamPF001701.2E-10111159IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1707.7E-12112160No hitNo description
SuperFamilySSF579592.13E-10112159No hitNo description
PROSITE patternPS000360115129IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    Send to blast
MASWPPKPTE IFCVHAREKA MASSPCDCWP HLSPPSSIEH VWNDIKLDSL SNSPVDIDFN  60
NNHSVSDSSF LNLTSTSSSV FHKHDHDHSL LSVSNTSFEA SGSKKTTLLD QRHARIIKNR  120
ESAVRSRARK QAYRKGLEVE IARLTEENSR LKRQLKELQC CLSSSDNPPT PRMAALCRTS  180
SSPF
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN45946.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0993103e-63BT099310.1 Soybean clone JCVI-FLGm-13N17 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001236963.11e-133bZIP transcription factor bZIP46
RefseqXP_028227447.11e-133protein FD-like
TrEMBLA0A445KUK11e-131A0A445KUK1_GLYSO; Protein FD
TrEMBLQ0GPI11e-131Q0GPI1_SOYBN; BZIP transcription factor bZIP46
STRINGGLYMA04G02420.11e-132(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1633979
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56850.15e-18ABA-responsive element binding protein 3
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]