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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KHN43939.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | SAP | ||||||||
Protein Properties | Length: 141aa MW: 15712.9 Da PI: 8.4782 | ||||||||
Description | SAP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SAP | 167.3 | 1.1e-51 | 1 | 139 | 324 | 455 |
SAP 324 lvvfdlrnqgvvlreeeerrGlivssldasneayvvvdsrGvatvrrvenleevcrfrvrg.aqrgvlgCvnggyalvyagg.....vlrvWeiekkeg 416 +v+f++rn++v+lr++ +++G++vssldas+eayvv++++Gv+tvrr++++e+++rfr+++ + rg+++C+n+gy+l+y+++ lrvW+ie+++g KHN43939.1 1 MVCFSFRNPEVLLRDVGSTMGFVVSSLDASQEAYVVLERNGVGTVRRASTYERLSRFRLNRlWVRGLWACMNLGYVLTYSPApspspSLRVWDIEQAIG 99 69******************************************************************************99999999*********99 PP SAP 417 .ylyslrervgevnalvaddrhvavsssdgtihlldfgaq 455 ++++l +r+g+vn+lva+drhv++ss+d++i+lldfg+q KHN43939.1 100 rLCVTLGVRAGYVNSLVANDRHVSISSNDNNINLLDFGVQ 139 9*************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 141 aa Download sequence Send to blast |
MVCFSFRNPE VLLRDVGSTM GFVVSSLDAS QEAYVVLERN GVGTVRRAST YERLSRFRLN 60 RLWVRGLWAC MNLGYVLTYS PAPSPSPSLR VWDIEQAIGR LCVTLGVRAG YVNSLVANDR 120 HVSISSNDNN INLLDFGVQD P |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KHN43939.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_003518569.1 | 2e-95 | transcriptional regulator STERILE APETALA | ||||
Refseq | XP_028222276.1 | 2e-95 | transcriptional regulator STERILE APETALA-like | ||||
TrEMBL | A0A0B2SI56 | 1e-97 | A0A0B2SI56_GLYSO; Transcriptional regulator STERILE APETALA | ||||
TrEMBL | A0A445LWD4 | 4e-94 | A0A445LWD4_GLYSO; Transcriptional regulator STERILE APETALA | ||||
TrEMBL | I1JJP3 | 5e-94 | I1JJP3_SOYBN; Uncharacterized protein | ||||
STRING | GLYMA02G47470.1 | 8e-95 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF7687 | 31 | 46 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G35770.1 | 2e-12 | SAP family protein |
Publications ? help Back to Top | |||
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