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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KHN43938.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | SAP | ||||||||
Protein Properties | Length: 146aa MW: 15253.2 Da PI: 5.6141 | ||||||||
Description | SAP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SAP | 80.9 | 1.7e-25 | 6 | 101 | 2 | 82 |
SAP 2 ssssssssseseegseggeggdass..............gesegp.sssrqraanevwpePflealatqvaidasrslGrlaaasalanvfqvcst 82 sssssssss+s++++++++++da + g++e++ ss+rqra+nev+peP+lealatq+a+da++++Grl+aasala++fqv++ KHN43938.1 6 SSSSSSSSSSSSSSTSSSTPYDAVApdipgpstrrtggtGQFEASsSSQRQRAMNEVLPEPLLEALATQLALDAASYNGRLSAASALAILFQVATF 101 34444444555555566677777779*************8888761578999*****************************************975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 146 aa Download sequence Send to blast |
MSSTSSSSSS SSSSSSSSST SSSTPYDAVA PDIPGPSTRR TGGTGQFEAS SSSQRQRAMN 60 EVLPEPLLEA LATQLALDAA SYNGRLSAAS ALAILFQVAT FLSSSSLYIS PLISLPHLTI 120 LLAVRVVNED KFFFMIAHIG WLCLPC |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KHN43938.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_028222276.1 | 5e-42 | transcriptional regulator STERILE APETALA-like | ||||
TrEMBL | A0A0B2SGI7 | 3e-97 | A0A0B2SGI7_GLYSO; Uncharacterized protein | ||||
STRING | GLYMA02G47470.1 | 7e-41 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF7687 | 31 | 46 |
Publications ? help Back to Top | |||
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