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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KHN43212.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | GeBP | ||||||||
Protein Properties | Length: 338aa MW: 37487.4 Da PI: 4.5244 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 81.7 | 1.1e-25 | 58 | 137 | 18 | 97 |
DUF573 18 GlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 G++d+++++ +s +++ fy+++k++++++++k+qlveKirrLKkK+++ +k+ sgke+sf+++hdq +fe+s+kiW KHN43212.1 58 GFLDYTSQRVSSHDSNTALFYDQIKSKLQLDFNKNQLVEKIRRLKKKYRNVLNKIGSGKEFSFKSAHDQATFEISRKIWS 137 9****9999988777****************************************************************6 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04504 | 4.5E-24 | 58 | 137 | IPR007592 | Protein of unknown function DUF573 |
Sequence ? help Back to Top |
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Protein Sequence Length: 338 aa Download sequence Send to blast |
MASQQHDAVF REEDMDDDDD ESQEDGDYEE EDDDVLADDE ENEPSPSTAL AVTVAVPGFL 60 DYTSQRVSSH DSNTALFYDQ IKSKLQLDFN KNQLVEKIRR LKKKYRNVLN KIGSGKEFSF 120 KSAHDQATFE ISRKIWSNVT PIGDNSLDDD EINPNRSPNP NLNFSPIILK NEMIFRNPAE 180 KKTPKRSRPR SAVKIEPNDG SASNRDHDCI SNATPTATAT AAATNTTPTA ATTNDNCNSG 240 YGNNIPSMIE ETVRSCLSPV LKELMAGAMG GGAFGARGFS LNLNPMPLMN WSFGGGEMVD 300 EKWRKQQILE LEVYSKRLEL VQDQIKAAME ELRSHGGG |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KHN43212.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_003553753.1 | 1e-172 | probable transcription factor At3g04930 | ||||
Refseq | XP_028218581.1 | 1e-172 | probable transcription factor At3g04930 | ||||
Swissprot | F4K5T4 | 2e-66 | STKLU_ARATH; Probable transcription factor At5g28040 | ||||
TrEMBL | A0A445FL00 | 1e-171 | A0A445FL00_GLYSO; Putative transcription factor | ||||
TrEMBL | I1NC70 | 1e-171 | I1NC70_SOYBN; Uncharacterized protein | ||||
STRING | GLYMA19G43180.1 | 1e-171 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF3255 | 33 | 65 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G28040.1 | 1e-60 | DNA-binding storekeeper protein-related transcriptional regulator |
Publications ? help Back to Top | |||
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