PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja

Family

bZIP

Protein Properties

Length: 369aa MW: 40068.4 Da PI: 8.2793

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
KHN43190.1	genome	TCUHK	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	49.2	1.1e-15	177	231	4	58
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 kr rr+ +NRe+ArrsR+RK+a + eLe+ v +L +eN++L k+ ++++ + KHN43190.1 177 AKRVRRMLSNRESARRSRRRKQAHLTELETQVSQLRSENSSLLKRFTDVSQKYNN 231 79*****************************************999888887765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	3.0E-19	174	238	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	2.9E-12	176	230	No hit	No description
PROSITE profile	PS50217	11.588	176	230	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	3.7E-13	177	229	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	5.87E-12	178	229	No hit	No description
PROSITE pattern	PS00036	0	181	196	IPR004827	Basic-leucine zipper domain
Pfam	PF12498	9.4E-41	245	358	IPR020983	Basic leucine-zipper, C-terminal

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0000165	Biological Process	MAPK cascade
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005622	Cellular Component	intracellular
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0004707	Molecular Function	MAP kinase activity
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 369 aa Download sequence Send to blast
MNRSESEWAF QQFLQEAAAS SSSNSDHHHL KFKNEFNINI PVTTTSIQNI NVDSQDYHAI 60 LKTKLNLACA AVAMTRGSLV KSQNPATFSD SGPQASNSSE DGLQATLKGS GPSGNDPSKL 120 QNKDVKAQIG IPSSSSMQNK PAVAMRPTIS GSSGEQSDDE EVEGEINMTE NMTPVDAKRV 180 RRMLSNRESA RRSRRRKQAH LTELETQVSQ LRSENSSLLK RFTDVSQKYN NAAVDNRVLK 240 ADVETLRTKV KMAEETVKRI TGLNPMLHAI TEMSSMAMPS FDESPSETSA DAAVSVQEDP 300 NHHRCQPTSN NGLGGISSIE TVQQNVAAVV GGNKTGRTTS LHRVASLEHL QKRIRGGADS 360 RGPPSNGEQ

Sequence ? help Back to Top

Protein Sequence Length: 369 aa Download sequence Send to blast

MNRSESEWAF QQFLQEAAAS SSSNSDHHHL KFKNEFNINI PVTTTSIQNI NVDSQDYHAI  60
LKTKLNLACA AVAMTRGSLV KSQNPATFSD SGPQASNSSE DGLQATLKGS GPSGNDPSKL  120
QNKDVKAQIG IPSSSSMQNK PAVAMRPTIS GSSGEQSDDE EVEGEINMTE NMTPVDAKRV  180
RRMLSNRESA RRSRRRKQAH LTELETQVSQ LRSENSSLLK RFTDVSQKYN NAAVDNRVLK  240
ADVETLRTKV KMAEETVKRI TGLNPMLHAI TEMSSMAMPS FDESPSETSA DAAVSVQEDP  300
NHHRCQPTSN NGLGGISSIE TVQQNVAAVV GGNKTGRTTS LHRVASLEHL QKRIRGGADS  360
RGPPSNGEQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	190	197	RRSRRRKQ
2	192	197	SRRRKQ

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	KHN43190.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	BT093254	0.0	BT093254.1 Soybean clone JCVI-FLGm-24C5 unknown mRNA.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_003554695.1	0.0	light-inducible protein CPRF2
Refseq	XP_028218673.1	0.0	light-inducible protein CPRF2-like
Swissprot	Q99090	1e-104	CPRF2_PETCR; Light-inducible protein CPRF2
TrEMBL	A0A445FL30	0.0	A0A445FL30_GLYSO; Light-inducible protein CPRF2
TrEMBL	I1NC96	0.0	I1NC96_SOYBN; Uncharacterized protein
STRING	GLYMA19G43420.1	0.0	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF4176	33	58

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28770.2	1e-65	bZIP family protein

Publications ? help Back to Top
Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness. EMBO J., 1991. 10(7): p. 1777-86 [PMID:2050115] Qi X, et al. Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing. Nat Commun, 2014. 5: p. 4340 [PMID:25004933]