PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KHN43166.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | G2-like | ||||||||
Protein Properties | Length: 383aa MW: 42686.5 Da PI: 4.8877 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 109.6 | 1.6e-34 | 191 | 245 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr+rWtpeLHe+Fveav+qLGGs+kAtPk +l+lmkv+gLt++hvkSHLQkYR+ KHN43166.1 191 KPRMRWTPELHEAFVEAVNQLGGSDKATPKGVLNLMKVEGLTIYHVKSHLQKYRT 245 79****************************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 11.906 | 188 | 248 | IPR017930 | Myb domain |
Gene3D | G3DSA:1.10.10.60 | 1.4E-32 | 189 | 247 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 2.69E-18 | 189 | 245 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 1.9E-25 | 191 | 245 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 6.8E-10 | 193 | 244 | IPR001005 | SANT/Myb domain |
Pfam | PF14379 | 7.7E-21 | 278 | 322 | IPR025756 | MYB-CC type transcription factor, LHEQLE-containing domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 383 aa Download sequence Send to blast |
MSTSSRALPT PLENKYMKPP DSFQLSPVRD LTANSASSNS IRSAGKMLSS PSECPDDIPF 60 SFVSQTSGDN VSSEIHSTAL ISHPQDNEDL SWGPDPFQDI LGFPENVSVQ HDQVQNNGCY 120 INDDNVKRSD FGEWVDQLMS IDDSLHPNWS QLLGDDNVAE PKPKASHVPQ QQHIASVEVV 180 GNSASTAPQT KPRMRWTPEL HEAFVEAVNQ LGGSDKATPK GVLNLMKVEG LTIYHVKSHL 240 QKYRTARYKP EPSEGNSEKK VTPMEEMKSL DLKTSKGITE AFRLQMELQK RLHEQLEIQR 300 KLQIQIEDQG KRLQMMFEKQ GEMGDNKVNG SSDTNEEGDK FESIPKAMPE EKDSSTRKQI 360 AGEAEEVINE DEAAPPTKRV KSS |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4k_A | 3e-31 | 191 | 249 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 3e-31 | 191 | 249 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 3e-31 | 191 | 249 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 3e-31 | 191 | 249 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 3e-31 | 191 | 249 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 3e-31 | 191 | 249 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 3e-31 | 191 | 249 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 3e-31 | 191 | 249 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor acting as central integrator of phosphate starvation responses (PubMed:20838596). Regulates FER1 expression upon phosphate starvation, linking iron and phosphate homeostasis (PubMed:23788639). {ECO:0000269|PubMed:20838596, ECO:0000269|PubMed:23788639}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KHN43166.1 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Not up-regulated by Pi starvation. {ECO:0000269|PubMed:26586833}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | BT096172 | 0.0 | BT096172.1 Soybean clone JCVI-FLGm-25F17 unknown mRNA. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | NP_001242015.2 | 0.0 | MYB-CC domain-containing transcription factor PHR33 | ||||
Refseq | NP_001348550.1 | 0.0 | MYB-CC domain-containing transcription factor PHR33 | ||||
Refseq | XP_006603738.1 | 0.0 | MYB-CC domain-containing transcription factor PHR33 isoform X2 | ||||
Refseq | XP_028218882.1 | 0.0 | protein PHR1-LIKE 1-like isoform X2 | ||||
Refseq | XP_028218883.1 | 0.0 | protein PHR1-LIKE 1-like isoform X2 | ||||
Refseq | XP_028218884.1 | 0.0 | protein PHR1-LIKE 1-like isoform X2 | ||||
Swissprot | Q8GUN5 | 3e-88 | PHL1_ARATH; Protein PHR1-LIKE 1 | ||||
TrEMBL | A0A445FLF0 | 0.0 | A0A445FLF0_GLYSO; Protein PHR1-LIKE 1 isoform A | ||||
TrEMBL | I1NCC4 | 0.0 | I1NCC4_SOYBN; Uncharacterized protein | ||||
STRING | GLYMA19G43690.5 | 0.0 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1512 | 34 | 98 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G29000.2 | 1e-88 | G2-like family protein |
Publications ? help Back to Top | |||
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