PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja

Family

bZIP

Protein Properties

Length: 318aa MW: 35046.1 Da PI: 6.8982

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
KHN42146.1	genome	TCUHK	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	49.9	6.8e-16	248	292	5	49
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 +r++r++kNRe+A rsR+RK+a+++eLe kv +Le+eN++L+ ++ KHN42146.1 248 RRQKRMIKNRESAARSRARKQAYTQELEIKVSQLEEENERLRRQN 292 79****************************************765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	1.2E-14	241	293	No hit	No description
SMART	SM00338	3.0E-14	244	316	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.679	246	291	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.25E-11	248	294	No hit	No description
CDD	cd14707	1.10E-24	248	293	No hit	No description
Pfam	PF00170	3.8E-13	248	293	IPR004827	Basic-leucine zipper domain
PROSITE pattern	PS00036	0	251	266	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0009737	Biological Process	response to abscisic acid
GO:0005634	Cellular Component	nucleus
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 318 aa Download sequence Send to blast
MGSQSGATQD QEPKTGSLTR QGSLYNLTLD EVQNQLGNLG KPVGSMNLDE LLKSVWTVES 60 GTDAYMHHGG GQVVSAGSSL NPEQGSLTLS GDLSKKTIDE VWRDMQQNKS VGKERQPTLG 120 EMTLEDFLVK AGVSTEPFPN EDGAMAMSGV DSQHNTLQHA HWMQYQLTSV QQQQQPQQQN 180 SVMPGFSGFM AGHVVQQPKY SSVQDCILFI LPSSEALPSS LMAALSDSQT AGRKRVASGN 240 VVEKTVERRQ KRMIKNRESA ARSRARKQAY TQELEIKVSQ LEEENERLRR QNEIERALPS 300 APSPDPKHQL RRTSSAPL

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00409	DAP	Transfer from AT3G56850	Download

Cis-element ? help Back to Top
Source	Link
PlantRegMap	KHN42146.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AP015037	1e-138	AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_003520322.1	0.0	ABSCISIC ACID-INSENSITIVE 5-like protein 2
Refseq	XP_028223942.1	0.0	ABSCISIC ACID-INSENSITIVE 5-like protein 2
Swissprot	Q9LES3	1e-104	AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBL	A0A445L5T4	0.0	A0A445L5T4_GLYSO; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBL	I1JK14	0.0	I1JK14_SOYBN; Uncharacterized protein
STRING	GLYMA03G00580.1	0.0	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF1320	34	105

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56850.1	9e-90	ABA-responsive element binding protein 3

Publications ? help Back to Top
Qi X, et al. Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing. Nat Commun, 2014. 5: p. 4340 [PMID:25004933] Kim H, et al. ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis. Plant Mol. Biol., 2016. 90(3): p. 303-15 [PMID:26667153] Song C,Kim T,Chung WS,Lim CO The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions. Mol. Cells, 2017. 40(8): p. 577-586 [PMID:28756655]