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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
KHN41082.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
bHLH |
Protein Properties |
Length: 295aa MW: 32572.4 Da PI: 6.5178 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
KHN41082.1 | genome | TCUHK | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 30.1 | 8.5e-10 | 217 | 258 | 9 | 55 |
HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
++RR+ri +++ L+el+P+ K++ +++LekA+ Y+k Lq
KHN41082.1 217 AKNRRERISERLKILQELVPNG-----SKVDLVTMLEKAISYVKFLQ 258
69*******************5.....5******************9 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 295 aa
Download sequence Send
to blast |
MALSLTSNGV NEYQKCVVEE EDGSQSTNGL SNDSASAITH SPPLCSNSNE YVHNKSTHYQ 60 LEEAESLINF KANEYNTLIQ GSESFLSVQK SWLFPKESNL HEGYNQWNHA ISPKSTTDMR 120 LVQNFSCFET SAGYSSIFNG AKEKQHGESS SSGWLYSEPN VPSDSLLESA AQELVLTKRS 180 SMGENMQATN AKKPCTSASK AAKPKLNPFK DPQSVAAKNR RERISERLKI LQELVPNGSK 240 VDLVTMLEKA ISYVKFLQLQ VKVLAADEFW PVQGGKAPDI SQVRQAIDAI LSSQR
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KT031123 | 0.0 | KT031123.1 Glycine max clone HN_CCL_81 bHLH transcription factor (Glyma14g07590.1) mRNA, partial cds. |
Publications
? help Back to Top |
- Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH
Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature. Differentiation, 2010. 80(1): p. 1-8 [PMID:20219281] - Qi X, et al.
Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing. Nat Commun, 2014. 5: p. 4340 [PMID:25004933] - Kim CM,Dolan L
ROOT HAIR DEFECTIVE SIX-LIKE Class I Genes Promote Root Hair Development in the Grass Brachypodium distachyon. PLoS Genet., 2016. 12(8): p. e1006211 [PMID:27494519] - Feng Y, et al.
Ethylene promotes root hair growth through coordinated EIN3/EIL1 and RHD6/RSL1 activity in Arabidopsis. Proc. Natl. Acad. Sci. U.S.A., 2017. 114(52): p. 13834-13839 [PMID:29233944]
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