PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN40881.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family G2-like
Protein Properties Length: 265aa    MW: 29803.5 Da    PI: 9.474
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN40881.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like107.57.1e-3456109255
     G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                 prlrWtp+LH++Fv+av++LGG+++AtPk +l+lm+vkgLt++hvkSHLQ+YR+
  KHN40881.1  56 PRLRWTPDLHRCFVHAVQRLGGEDRATPKLVLQLMNVKGLTISHVKSHLQMYRS 109
                 8****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129410.84252112IPR017930Myb domain
Gene3DG3DSA:1.10.10.603.3E-3352111IPR009057Homeodomain-like
SuperFamilySSF466892.33E-1654110IPR009057Homeodomain-like
TIGRFAMsTIGR015575.2E-2556109IPR006447Myb domain, plants
PfamPF002491.4E-957108IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    Send to blast
MSSSSSSLVT TLVDNNNPTQ PSQLRAARRR FTSDHHLPEI SLKTPMVRPY VRSKMPRLRW  60
TPDLHRCFVH AVQRLGGEDR ATPKLVLQLM NVKGLTISHV KSHLQMYRSM RHEQMSQGAK  120
KNNMAPDFPA STLATLGPRQ QKPHKRSCTE ELVPTQAQWN HDEQECYNGN QGGESIIICN  180
GNEQKVHSYI IFEGLLRGQS VQENKTTTTE KVSLGDAGYE SDHQRFQDTT LSLSMSSRPS  240
SHSFLNRSHS TGPDANDVSL ELTLS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A4e-1957112459Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B4e-1957112459Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A4e-1957112358Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B4e-1957112358Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C4e-1957112358Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D4e-1957112358Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A4e-1957112459Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C4e-1957112459Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D4e-1957112459Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F4e-1957112459Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H4e-1957112459Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J4e-1957112459Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN40881.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150381e-60AP015038.1 Vigna angularis var. angularis DNA, chromosome 5, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003534706.20.0probable transcription factor KAN2
RefseqXP_028248163.10.0probable transcription factor KAN2
TrEMBLA0A445IUY70.0A0A445IUY7_GLYSO; Putative Myb family transcription factor (Fragment)
TrEMBLK7LB460.0K7LB46_SOYBN; Uncharacterized protein
STRINGGLYMA09G00685.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF93812840
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02060.16e-34G2-like family protein