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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KHN40442.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | WRKY | ||||||||
Protein Properties | Length: 161aa MW: 18114.3 Da PI: 8.0121 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 33.9 | 6.4e-11 | 113 | 134 | 1 | 22 |
---SS-EEEEEEE--TT-SS-E CS WRKY 1 ldDgynWrKYGqKevkgsefpr 22 ldDgy+WrKYGqK vk++++p KHN40442.1 113 LDDGYRWRKYGQKAVKNNTYPS 134 59*****************995 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 1.4E-11 | 100 | 133 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 9.81E-9 | 106 | 134 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 12.209 | 108 | 133 | IPR003657 | WRKY domain |
SMART | SM00774 | 3.8E-4 | 113 | 161 | IPR003657 | WRKY domain |
Pfam | PF03106 | 6.0E-7 | 114 | 134 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 161 aa Download sequence Send to blast |
MESQDPPNPP PQNNPFLFTP NSMLQSPNLD PQEQLGLCDI DWGNLFSAQN SFLLNGDAND 60 AIECASSSSF VAQNKVACEE EKGNKEKRKG GRMKKTTRVP RFAFQTRSAD DILDDGYRWR 120 KYGQKAVKNN TYPSALAVIW IKKYALNYQD AFITVFISQP G |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KHN40442.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | EU019592 | 0.0 | EU019592.1 Glycine max WRKY64 (WRKY64) mRNA, partial cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | NP_001348337.1 | 2e-96 | WRKY transcription factor 64 | ||||
Refseq | XP_028215578.1 | 2e-96 | probable WRKY transcription factor 43 | ||||
TrEMBL | A7LHJ3 | 2e-95 | A7LHJ3_SOYBN; Transcription factor (Fragment) | ||||
STRING | GLYMA18G47350.1 | 6e-96 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF3227 | 34 | 71 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G41570.1 | 7e-16 | WRKY DNA-binding protein 24 |
Publications ? help Back to Top | |||
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