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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KHN39989.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | WRKY | ||||||||
Protein Properties | Length: 203aa MW: 22623.3 Da PI: 8.31 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 41.7 | 2.3e-13 | 106 | 156 | 12 | 59 |
EE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 12 qKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 qK+ +g + rsY+rC ++ gC++ k+v+r++e+p++ itY g H+++ KHN39989.1 106 QKDGRGRYNRRSYFRCGYKydqGCKANKQVQRDQENPNMYRITYIGIHTCN 156 89999*************99999**************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50811 | 12.989 | 103 | 158 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 4.3E-13 | 106 | 156 | IPR003657 | WRKY domain |
Pfam | PF03106 | 3.3E-13 | 106 | 155 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 5.75E-13 | 106 | 157 | IPR003657 | WRKY domain |
SMART | SM00774 | 5.4E-13 | 106 | 157 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 203 aa Download sequence Send to blast |
MNNIVCFASE ISVSTQKKRV IIEELLKGQE AATQLKVLLL EKPFWSEASL SFQEVMDNVL 60 RSFSEALSIL NSSSSSEPAG SAAEVAHRSL LNSGQPEAAS GEKRFQKDGR GRYNRRSYFR 120 CGYKYDQGCK ANKQVQRDQE NPNMYRITYI GIHTCNATPK ATHSATDSNT WESFLLNSDG 180 EVPNSPSLTI KQQFPKESTS SLI |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KHN39989.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006596397.1 | 1e-135 | probable WRKY transcription factor 70 | ||||
TrEMBL | K7M7W8 | 1e-134 | K7M7W8_SOYBN; Uncharacterized protein | ||||
STRING | GLYMA14G36446.1 | 1e-134 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF4700 | 30 | 56 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56400.1 | 4e-17 | WRKY DNA-binding protein 70 |
Publications ? help Back to Top | |||
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