PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KHN37827.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | G2-like | ||||||||
Protein Properties | Length: 371aa MW: 40704 Da PI: 6.6805 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 102.4 | 2.9e-32 | 198 | 253 | 1 | 56 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+++LH+rF++a++qLGG++ AtPk+i+e+m+v+gLt+++vkSHLQkYRl+ KHN37827.1 198 KQRRCWSQDLHKRFLHALQQLGGADTATPKQIREIMNVDGLTNDEVKSHLQKYRLH 253 79****************************************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 12.487 | 195 | 255 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 6.81E-18 | 196 | 256 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 4.1E-29 | 196 | 256 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 3.3E-27 | 198 | 253 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 6.7E-7 | 200 | 251 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 371 aa Download sequence Send to blast |
MGFPDYIQTL EEERRKIQVF SKELPLSLEL VTQAIEACKQ QLSGTTSEYN LNGHSECSEQ 60 TTSTEGPVLE EFIPIKKMAS SSPFCDEEDE DDEQHSHKQR VSKENNNSDK RKSDWLRSVQ 120 LWNPDPPAEE DVNKKVPGLE LKRSGNGGGA FQPFHKEERG AKTSESLSKA PSSTSVAAAS 180 SSAAEPAAEK SLNEGQRKQR RCWSQDLHKR FLHALQQLGG ADTATPKQIR EIMNVDGLTN 240 DEVKSHLQKY RLHTRRPSPM VHNSSNPQAA PFVLVGNIFV QSPEYAAVAT STASREVATV 300 AAPAGIYAPV ATHPTPVSHP PADSIKNPQF KKVKLFEHSI SDERANHSEG AVHSNSPTSS 360 SSTHTSTSLG Y |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor involved in phosphate signaling in roots. {ECO:0000250|UniProtKB:Q9FX67}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KHN37827.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | KT031196 | 0.0 | KT031196.1 Glycine max clone HN_CCL_161 MYB/HD-like transcription factor (Glyma10g34780.1) mRNA, partial cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_028186163.1 | 0.0 | transcription factor HHO3-like | ||||
Swissprot | Q9FPE8 | 1e-89 | HHO3_ARATH; Transcription factor HHO3 | ||||
TrEMBL | A0A445IQ48 | 0.0 | A0A445IQ48_GLYSO; Transcription factor HHO3 isoform A | ||||
STRING | GLYMA10G34780.1 | 0.0 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF3918 | 33 | 63 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G25550.1 | 7e-84 | G2-like family protein |
Publications ? help Back to Top | |||
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