PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja

Family

bZIP

Protein Properties

Length: 438aa MW: 48657.4 Da PI: 6.5232

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
KHN37699.1	genome	TCUHK	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	30.2	1e-09	151	193	3	45
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 + k rr+++NReAAr+sR+RKka++++Le +L++ ++L KHN37699.1 151 DQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQEL 193 568899************************9777777666555 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	8.9E-8	143	196	No hit	No description
Pfam	PF07716	6.2E-7	149	195	IPR004827	Basic-leucine zipper domain
SMART	SM00338	8.7E-8	149	212	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.415	151	195	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	6.88E-7	153	196	No hit	No description
CDD	cd14708	6.99E-23	153	205	No hit	No description
PROSITE pattern	PS00036	0	156	171	IPR004827	Basic-leucine zipper domain
Pfam	PF14144	2.5E-33	235	310	IPR025422	Transcription factor TGA like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0009410	Biological Process	response to xenobiotic stimulus
GO:0009627	Biological Process	systemic acquired resistance
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 438 aa Download sequence Send to blast
MVFSYTEGNT IDSFRVSDFG AFDQSYHIED AVDLSGNPVY NSLKVNSQTI SPGSVHISSL 60 GQLPISLEKS PLTNQTEPPH RLRLQKVQSS NPGTILVGNT DNWEESTMAD ASPRTDISTD 120 GDTDDKNHPF DRNQALTAVS DSSDRSKDKS DQKTLRRLAQ NREAARKSRL RKKAYVQQLE 180 SSRLKLTQLE QELQRARQQG IFISSSGDQA HTLSGNGAMQ FDAEYARWLE EQNRQINELR 240 AAVNSHASDT ELRMIVDGIL AHYDEIFRLK GVAAKADVFH LLSGMWKTPA ERCFLWLGGF 300 RSSELLKLLV SQLEPLTEQQ LMGITNLQQS SQQAEDALSQ GMEALQQSLA ETLSTGAPAS 360 SGSSGNVASY MGQMAMAMGK LGTLEGFIQQ ADNLRQQTLQ QMHRILTTRQ SARALLAIHD 420 YISRLRALSS LWLARPRD

Sequence ? help Back to Top

Protein Sequence Length: 438 aa Download sequence Send to blast

MVFSYTEGNT IDSFRVSDFG AFDQSYHIED AVDLSGNPVY NSLKVNSQTI SPGSVHISSL  60
GQLPISLEKS PLTNQTEPPH RLRLQKVQSS NPGTILVGNT DNWEESTMAD ASPRTDISTD  120
GDTDDKNHPF DRNQALTAVS DSSDRSKDKS DQKTLRRLAQ NREAARKSRL RKKAYVQQLE  180
SSRLKLTQLE QELQRARQQG IFISSSGDQA HTLSGNGAMQ FDAEYARWLE EQNRQINELR  240
AAVNSHASDT ELRMIVDGIL AHYDEIFRLK GVAAKADVFH LLSGMWKTPA ERCFLWLGGF  300
RSSELLKLLV SQLEPLTEQQ LMGITNLQQS SQQAEDALSQ GMEALQQSLA ETLSTGAPAS  360
SGSSGNVASY MGQMAMAMGK LGTLEGFIQQ ADNLRQQTLQ QMHRILTTRQ SARALLAIHD  420
YISRLRALSS LWLARPRD

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional regulator involved in defense response. {ECO:0000250\|UniProtKB:Q7X993}.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00349	DAP	Transfer from AT3G12250	Download

Cis-element ? help Back to Top
Source	Link
PlantRegMap	KHN37699.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	BT096311	0.0	BT096311.1 Soybean clone JCVI-FLGm-25J1 unknown mRNA.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_014621165.1	0.0	bZIP transcription factor bZIP99 isoform X2
Swissprot	Q6IVC2	0.0	TGAL1_ORYSJ; Transcription factor TGAL1
TrEMBL	A0A0R0GZ65	0.0	A0A0R0GZ65_SOYBN; Uncharacterized protein
TrEMBL	A0A445I727	0.0	A0A445I727_GLYSO; Transcription factor TGAL1 isoform A
STRING	GLYMA13G26280.1	0.0	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF1470	34	94

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G12250.2	1e-155	TGACG motif-binding factor 6

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764] Chern M, et al. Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins. BMC Genomics, 2014. 15: p. 461 [PMID:24919709] Qi X, et al. Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing. Nat Commun, 2014. 5: p. 4340 [PMID:25004933]