PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN37664.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family MYB_related
Protein Properties Length: 316aa    MW: 36473.8 Da    PI: 4.603
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN37664.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.14e-08246299146
                      TSSS-HHHHHHHHHHHHHTTTT....-HHHHHHHHT....TTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg....tWktIartmg....kgRtlkqcksrwqk 46 
                      r+ WT+eE++ l+++v ++ ++     W++I +       ++Rt+ ++k++w +
       KHN37664.1 246 RLLWTAEEEKVLKEGVSKFSTEnqniPWRKILEFGCrvfdETRTPVDLKDKWKN 299
                      677****************************9987799**************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.606.0E-11239309IPR009057Homeodomain-like
PROSITE profilePS5129410.579241305IPR017930Myb domain
SuperFamilySSF466892.37E-10244302IPR009057Homeodomain-like
SMARTSM007171.1E-5245303IPR001005SANT/Myb domain
PfamPF002498.3E-6248299IPR001005SANT/Myb domain
CDDcd116608.01E-11249301No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009751Biological Processresponse to salicylic acid
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    Send to blast
MEETGTQAQS KDNKDEEGEA RVNQVHDREE TETEPEGNKE KEGKVRDNEE LVEERERKTV  60
TEAQSQENKA EEDKFQDDSE ELVVETETET EVQCEENKEE GKVRDSEEHV EEMETETGAE  120
AQPEEKKDEG KVRDSEKLVE ETQTETEGQS EEKKDEEGKV AVMSSSVSET YDSDSVAVSM  180
KKRKDKKKKV TSARKSLSLQ QEHKNKHYKT RGKVANEEEV TSFKTTSLGQ QPQRMKQSSL  240
AAKRKRLLWT AEEEKVLKEG VSKFSTENQN IPWRKILEFG CRVFDETRTP VDLKDKWKNI  300
ISKKSRSTDC SYTFDL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1181188KRKDKKKK
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN37664.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150391e-45AP015039.1 Vigna angularis var. angularis DNA, chromosome 6, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006594392.10.0troponin T, cardiac muscle
RefseqXP_006594393.10.0troponin T, cardiac muscle
RefseqXP_028190924.10.0troponin T, cardiac muscle-like
RefseqXP_028190925.10.0troponin T, cardiac muscle-like
TrEMBLA0A445I7L20.0A0A445I7L2_GLYSO; Uncharacterized protein
STRINGGLYMA13G26790.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF120552022
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]