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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KHN36916.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | BES1 | ||||||||
Protein Properties | Length: 95aa MW: 11532.1 Da PI: 10.7081 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 157.6 | 8.8e-49 | 3 | 72 | 2 | 71 |
DUF822 2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrk 71 + r+ptwkErEnnkrRERrRRaiaaki++GLR++Gnyklpk++DnneVlkALc+eAGw+ve+DGttyrk KHN36916.1 3 SVARQPTWKERENNKRRERRRRAIAAKIFSGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVEADGTTYRK 72 5689*****************************************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 1.5E-43 | 5 | 72 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
Sequence ? help Back to Top |
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Protein Sequence Length: 95 aa Download sequence Send to blast |
MTSVARQPTW KERENNKRRE RRRRAIAAKI FSGLRMYGNY KLPKHCDNNE VLKALCNEAG 60 WTVEADGTTY RKWHGTCYWW WESEGRERRR ELRKG |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5zd4_A | 6e-22 | 6 | 72 | 372 | 438 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_B | 6e-22 | 6 | 72 | 372 | 438 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_C | 6e-22 | 6 | 72 | 372 | 438 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_D | 6e-22 | 6 | 72 | 372 | 438 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | May function in brassinosteroid signaling. {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KHN36916.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_003543196.1 | 1e-44 | BES1/BZR1 homolog protein 4 isoform X1 | ||||
Refseq | XP_006594721.1 | 2e-44 | BES1/BZR1 homolog protein 4 isoform X2 | ||||
Refseq | XP_028190417.1 | 1e-44 | BES1/BZR1 homolog protein 4-like isoform X1 | ||||
Refseq | XP_028190418.1 | 2e-44 | BES1/BZR1 homolog protein 4-like isoform X2 | ||||
Swissprot | Q5Z9E5 | 3e-26 | BZR3_ORYSJ; Protein BZR1 homolog 3 | ||||
TrEMBL | A0A445IAK8 | 4e-43 | A0A445IAK8_GLYSO; BES1/BZR1-like protein 4 isoform A | ||||
TrEMBL | A0A445IB09 | 3e-43 | A0A445IB09_GLYSO; BES1/BZR1-like protein 4 isoform B | ||||
TrEMBL | I1M2X8 | 3e-43 | I1M2X8_SOYBN; Uncharacterized protein | ||||
TrEMBL | I1M2Y0 | 4e-43 | I1M2Y0_SOYBN; Uncharacterized protein | ||||
STRING | GLYMA13G34180.1 | 6e-44 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF15152 | 11 | 13 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G78700.1 | 4e-26 | BES1/BZR1 homolog 4 |
Publications ? help Back to Top | |||
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