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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
KHN33594.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
bHLH |
Protein Properties |
Length: 347aa MW: 39183.8 Da PI: 8.5957 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
KHN33594.1 | genome | TCUHK | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 39.3 | 1.2e-12 | 171 | 218 | 3 | 55 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+ h ++Er+RR+++ ++f L l+P + kK++Ka++L +A++Y+k++q
KHN33594.1 171 QDHIIAERKRREKLSQRFIALSALVPGL-----KKMDKASVLGEAIKYLKQMQ 218
5799************************.....9*****************99 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 347 aa
Download sequence Send
to blast |
MRSSHMEISS IRGLPELGII EDPNFLHQWQ LNSIDTTSLK GAAFGDILQK HSFSDNSNFN 60 PKTSMETSQT GIERYAKQLG DNSWNHNKSQ QQTPETQFAS CSNLLSFVNT NYTSELGLVK 120 PKVEMACPKI DNNALADMLI SQGTLGNQNY IFKANQETKK IKTRPKLSQP QDHIIAERKR 180 REKLSQRFIA LSALVPGLKK MDKASVLGEA IKYLKQMQEK VSALEEEQNR KRTVESVVIV 240 KKSQLSSDAE DSSSETGGTF VEALPEIEAR FWERNVLIRI HCEKNKGVIE KTISEIEKLH 300 LKVINSSALT FGSFILDITI IAQMDMEFCM TVKDLVRSLR SAFSYFV
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
5gnj_A | 1e-14 | 169 | 228 | 5 | 64 | Transcription factor MYC2 |
5gnj_B | 1e-14 | 169 | 228 | 5 | 64 | Transcription factor MYC2 |
5gnj_E | 1e-14 | 169 | 228 | 5 | 64 | Transcription factor MYC2 |
5gnj_F | 1e-14 | 169 | 228 | 5 | 64 | Transcription factor MYC2 |
5gnj_G | 1e-14 | 169 | 228 | 5 | 64 | Transcription factor MYC2 |
5gnj_I | 1e-14 | 169 | 228 | 5 | 64 | Transcription factor MYC2 |
5gnj_M | 1e-14 | 169 | 228 | 5 | 64 | Transcription factor MYC2 |
5gnj_N | 1e-14 | 169 | 228 | 5 | 64 | Transcription factor MYC2 |
Search in ModeBase |
Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 176 | 181 | ERKRRE |
2 | 177 | 182 | RKRREK |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By ethylene (ACC) and jasmonic acid (JA) treatments. {ECO:0000269|PubMed:12679534}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AF069738 | 0.0 | AF069738.1 Glycine max symbiotic ammonium transporter (SAT1) mRNA, complete cds. |