PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN31491.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family G2-like
Protein Properties Length: 435aa    MW: 48581.5 Da    PI: 5.3626
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN31491.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like105.33.5e-33230284155
     G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                 k+r+rWtpeLHe+Fveav++LGGsekAtPk +l+ mkv+gLt++hvkSHLQkYR+
  KHN31491.1 230 KARMRWTPELHEAFVEAVNHLGGSEKATPKGVLNQMKVEGLTIYHVKSHLQKYRT 284
                 68****************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129412.661227287IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.3E-30228286IPR009057Homeodomain-like
SuperFamilySSF466895.91E-17228284IPR009057Homeodomain-like
TIGRFAMsTIGR015574.6E-25230284IPR006447Myb domain, plants
PfamPF002491.8E-9232283IPR001005SANT/Myb domain
PfamPF143796.3E-21317361IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 435 aa     Download sequence    Send to blast
MTLVICQCLP LTNGQTKLIH LGASRAMSTS SRVLPTPLEN KYMKPPDSFQ LSPVRDLTAN  60
SASSNSIRSA GKMFSSPSKC PDDFPFSSVS QHDRQYQDPP FVSQTIGDSV SSEIHSMTFI  120
SHPQENEDLS WGPDPCQDIL GFPENVSVQH DQVENNGCYI NDDNVKRSDF GEWVDQLMSI  180
DDSLHPSWSQ LLADDNVAEP KPKASQVPPQ QHIPSGEVVG NSASTASQTK ARMRWTPELH  240
EAFVEAVNHL GGSEKATPKG VLNQMKVEGL TIYHVKSHLQ KYRTARYKPE PSEGTSEKKV  300
TPMEEMKSLD LKTSKGITEA LRLQMELQKR LHEQLEIQRK LQIQIEDQGK RLQMMFEKQR  360
EMGDSKVNVS LDEPSAAAPS ETVETTNEER HKFESIPKAI PEEKESSTTK QIAGEAEEMI  420
KEDEVAPPTK RVKSS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A8e-31230288260Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B8e-31230288260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A8e-31230288260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C8e-31230288260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D8e-31230288260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F8e-31230288260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H8e-31230288260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J8e-31230288260Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor acting as central integrator of phosphate starvation responses (PubMed:20838596). Regulates FER1 expression upon phosphate starvation, linking iron and phosphate homeostasis (PubMed:23788639). {ECO:0000269|PubMed:20838596, ECO:0000269|PubMed:23788639}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00532DAPTransfer from AT5G29000Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN31491.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Not up-regulated by Pi starvation. {ECO:0000269|PubMed:26586833}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJN2015270.0JN201527.1 Glycine max PHR2 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014629521.10.0MYB-CC domain-containing transcription factor PHR10 isoform X1
RefseqXP_028226742.10.0protein PHR1-LIKE 1-like isoform X1
SwissprotQ8GUN58e-92PHL1_ARATH; Protein PHR1-LIKE 1
TrEMBLA0A0B2RAD00.0A0A0B2RAD0_GLYSO; Myb family transcription factor APL
TrEMBLK7KGY40.0K7KGY4_SOYBN; Uncharacterized protein
STRINGGLYMA03G41040.30.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF15123498
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G29000.21e-92G2-like family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  3. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]
  4. Bonnot C, et al.
    A chemical genetic strategy identify the PHOSTIN, a synthetic molecule that triggers phosphate starvation responses in Arabidopsis thaliana.
    New Phytol., 2016. 209(1): p. 161-76
    [PMID:26243630]
  5. Aleksza D,Horváth GV,Sándor G,Szabados L
    Proline Accumulation Is Regulated by Transcription Factors Associated with Phosphate Starvation.
    Plant Physiol., 2017. 175(1): p. 555-567
    [PMID:28765275]