PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN31050.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family G2-like
Protein Properties Length: 375aa    MW: 41406.7 Da    PI: 6.5227
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN31050.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like51.91.7e-162582882656
     G2-like  26 kAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                  AtPk+i+elm+v+gLt+++vkSHLQkYRl+
  KHN31050.1 258 AATPKQIRELMQVDGLTNDEVKSHLQKYRLH 288
                 69***************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466892.15E-6258291IPR009057Homeodomain-like
TIGRFAMsTIGR015572.9E-13258288IPR006447Myb domain, plants
Gene3DG3DSA:1.10.10.601.4E-14258291IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 375 aa     Download sequence    Send to blast
MGSVAAEELN LDLRSSFVPK TITDFLRHLS ANNNHPATLR DFLSRLEDEL RKIHAFKREL  60
PLSMLLLNDA ISVLKVESQK CCRVARDSPP VLEEFIPLKK ELGDQSEEEE ENDDDKDDNE  120
CRDKRNWMSS VQLWNNNTTT TTTNNNNNAS DRKQLLHKLQ TKKSEEGQSV AEDPFQTCSN  180
RNGGRRAFMP FSRYSSSSSS VPVTTVGLGA ASKEEKEESV RNRLSLLTPS VKEGCGSRGS  240
RSSSNRAVSS SPPTAQPAAT PKQIRELMQV DGLTNDEVKS HLQKYRLHTR RVPAASSNQP  300
VVVLGGLWMS QDQYNDSSKV SSSGSGSPQS PLHLAAGSRG GTSPTEGDSI EDDEDARSES  360
YSWKSHMNKP GKVDV
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN31050.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0963771e-143BT096377.1 Soybean clone JCVI-FLGm-15D9 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003529382.10.0transcription factor HHO2 isoform X1
TrEMBLI1KLX00.0I1KLX0_SOYBN; Uncharacterized protein
STRINGGLYMA07G33130.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF120834107
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37180.13e-28G2-like family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]