PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja

Family

bZIP

Protein Properties

Length: 199aa MW: 22954.8 Da PI: 5.7598

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
KHN29912.1	genome	TCUHK	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	48.3	2.2e-15	83	140	5	62
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 ++ rr+++NRe+ArrsR RK++ ++eL v L +eN++L+++l++ ++ +++ +e KHN29912.1 83 RKHRRMISNRESARRSRMRKQKHLDELWSQVVRLRTENHSLIDKLNHVSESHDRVLQE 140 688********************************************99988887776 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.9E-15	79	143	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.772	81	144	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	3.44E-13	83	133	No hit	No description
Gene3D	G3DSA:1.20.5.170	3.5E-13	83	156	No hit	No description
Pfam	PF00170	2.2E-13	83	141	IPR004827	Basic-leucine zipper domain
CDD	cd14702	8.22E-21	84	135	No hit	No description
PROSITE pattern	PS00036	0	86	101	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0000165	Biological Process	MAPK cascade
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005622	Cellular Component	intracellular
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0004707	Molecular Function	MAP kinase activity
GO:0042803	Molecular Function	protein homodimerization activity
GO:0043565	Molecular Function	sequence-specific DNA binding
GO:0046982	Molecular Function	protein heterodimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 199 aa Download sequence Send to blast
MVPSEIRGVH YLAPENPFLV PPNFSLLQND IPNLHLNTLL RNFPNCHYPP SGHEFVVPPS 60 SCLSNNSTSD EADEIQFNII DERKHRRMIS NRESARRSRM RKQKHLDELW SQVVRLRTEN 120 HSLIDKLNHV SESHDRVLQE NARLKEEASD LRQMLADMQI GTSFACTMED LEDLPCNTSQ 180 LLKPDPLNES ITPADMIHE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	95	102	RRSRMRKQ

Functional Description ? help Back to Top
Source	Description
UniProt	Probable transcription factor involved in somatic embryogenesis. Acts as positive regulator of BHLH109. {ECO:0000269\|PubMed:26973252}.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00389	DAP	Transfer from AT3G30530	Download

Cis-element ? help Back to Top
Source	Link
PlantRegMap	KHN29912.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AF350505	0.0	AF350505.1 Phaseolus vulgaris bZip transcription factor mRNA, complete cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_003518809.1	1e-145	basic leucine zipper 43
Refseq	XP_028204287.1	1e-145	basic leucine zipper 43-like
Swissprot	Q9FMC2	2e-37	BZP43_ARATH; Basic leucine zipper 43
TrEMBL	A0A445LN25	1e-144	A0A445LN25_GLYSO; Basic leucine zipper 43
TrEMBL	K7K7Z2	1e-144	K7K7Z2_SOYBN; Uncharacterized protein
STRING	GLYMA02G13960.2	1e-145	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF1604	33	99

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G30530.1	2e-50	basic leucine-zipper 42

Publications ? help Back to Top
Qi X, et al. Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing. Nat Commun, 2014. 5: p. 4340 [PMID:25004933] Nowak K,Gaj MD Stress-related function of bHLH109 in somatic embryo induction in Arabidopsis. J. Plant Physiol., 2016. 193: p. 119-26 [PMID:26973252] Ezer D, et al. The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470]