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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
KHN25875.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
|
| Family |
WRKY |
| Protein Properties |
Length: 358aa MW: 39485.2 Da PI: 6.8747 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| KHN25875.1 | genome | TCUHK | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 106.2 | 1.6e-33 | 186 | 243 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
+Dgy+WrKYGqK vk+s++prsYYrCt+++C+vkk+vers +dp++v++tYeg+Hnh+
KHN25875.1 186 EDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCTVKKRVERSFQDPTTVITTYEGQHNHP 243
8********************************************************7 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 358 aa
Download sequence Send
to blast |
MSVEPKELYY QDLVLDPNIN NQHQGTEAGS NNTMYEKHFS STIIPSDSTA YDSSQAFDPS 60
YMSLTECLQG GMDYNSLATS FGLSPSSSEV FSSVDGNQKP AVEGGDGGGG GGGSETLATL 120
NSSVSSSSSE AGAEEDSGKS KKERQVKTEE GEENSKKGNK EKKKGEKKQK EPRFAFMTKS 180
EVDHLEDGYR WRKYGQKAVK NSPYPRSYYR CTTQKCTVKK RVERSFQDPT TVITTYEGQH 240
NHPVPTSLRG NAAAGMFTPS SLLATPTPLA AGSNFPQDLF LHMHHPHHQY HIHNNLFTTQ 300
STTNTTTATT TTPSSFYSSY NNINNSLLHN QFLPPEYGLL QDIVPSMFHN KTGHHHQN
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015034 | 1e-103 | AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari. |
| Publications
? help Back to Top |
- Duarte JM, et al.
Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
Mol. Biol. Evol., 2006. 23(2): p. 469-78
[PMID:16280546] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
BMC Plant Biol., 2013. 13: p. 229
[PMID:24377444] - Qi X, et al.
Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
Nat Commun, 2014. 5: p. 4340
[PMID:25004933] - Kim SH, et al.
Characterization of a Novel DWD protein that participates in heat stress response in Arabidopsis.
Mol. Cells, 2014. 37(11): p. 833-40
[PMID:25358503] - Zhao L, et al.
KLU suppresses megasporocyte cell fate through SWR1-mediated activation of WRKY28 expression in Arabidopsis.
Proc. Natl. Acad. Sci. U.S.A., 2018. 115(3): p. E526-E535
[PMID:29288215]
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