PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN22286.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family G2-like
Protein Properties Length: 397aa    MW: 43997 Da    PI: 7.7813
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN22286.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like100.51.1e-31147200255
     G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                 pr+rWt++LH++Fv+av+ LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+
  KHN22286.1 147 PRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLSHVKSHLQMYRT 200
                 9****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466892.15E-15144201IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.606.7E-28145201IPR009057Homeodomain-like
TIGRFAMsTIGR015571.6E-23147200IPR006447Myb domain, plants
PfamPF002492.6E-7148199IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.630.109.4E-46260389IPR001128Cytochrome P450
SuperFamilySSF482642.88E-43260389IPR001128Cytochrome P450
PfamPF000677.4E-35261378IPR001128Cytochrome P450
PRINTSPR004632.1E-16288312IPR002401Cytochrome P450, E-class, group I
PRINTSPR004632.1E-16325335IPR002401Cytochrome P450, E-class, group I
PROSITE patternPS000860328337IPR017972Cytochrome P450, conserved site
PRINTSPR004632.1E-16335358IPR002401Cytochrome P450, E-class, group I
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0055114Biological Processoxidation-reduction process
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0004497Molecular Functionmonooxygenase activity
GO:0005506Molecular Functioniron ion binding
GO:0016705Molecular Functionoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037Molecular Functionheme binding
Sequence ? help Back to Top
Protein Sequence    Length: 397 aa     Download sequence    Send to blast
MYTTWHTGMA TFAPLPEPDL SLNISPPFIS DSDAKQVGIS CNGLTLTTKT LYNDMCSTSD  60
SGSSESDLSH ENGFFLMDTA YNLGHHELTL SLGIETENLN PYPVQQGALS RNNFSHHLHN  120
YQPHTNTLDF KRNARVIHGA KRNIRAPRMR WTTTLHAHFV HAVQLLGGHE RATPKSVLEL  180
MNVKDLTLSH VKSHLQMYRT VKSSDKGSAG YGQTGIGLSQ KPGIVDLHGV LACERPDLPQ  240
PLLKFQSNYQ GNLAAIPRAG PLLGPREAQE DCNVAGYHVP AGTRLVVNLW KLHRDPRVWE  300
EPSAFRPERF LTSDAVDVRG QNFELIPFGS GRRSCPGMPF ALQVLHLTLA RLLHVFEFAT  360
PSDQPVDMTE SPGLTMPKAT PLEVLLTSRL PAKLYAY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5ylw_A2e-30260385363490Ferruginol synthase
5ym3_A2e-30260385363490Ferruginol synthase
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN22286.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006581228.11e-179probable transcription factor KAN4
RefseqXP_028234216.11e-179probable transcription factor KAN4
TrEMBLA0A445K4951e-178A0A445K495_GLYSO; Putative transcription factor KAN4
TrEMBLK7KSW91e-178K7KSW9_SOYBN; Uncharacterized protein
STRINGGLYMA06G03901.11e-178(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF44633358
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42630.24e-45G2-like family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]