PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KHN21567.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | NAC | ||||||||
Protein Properties | Length: 366aa MW: 41731.8 Da PI: 9.1047 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 170.7 | 4.5e-53 | 5 | 131 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 lppGfrFhPtdeel+++yL +kv++ +++ ++++ vd +k+ePwdLp k++ +ekewyfFs +d+ky+tg r+nrat+sgyWk+tgkdke++ +g l KHN21567.1 5 LPPGFRFHPTDEELITYYLLRKVSDISFTS-KAVAVVDFNKSEPWDLPGKASMGEKEWYFFSLKDRKYPTGLRTNRATESGYWKTTGKDKEIFG-GGVL 101 79*************************999.88***************988999****************************************.**** PP NAM 100 vglkktLvfykgrapkgektdWvmheyrle 129 +g+kktLvfy grap+gek++Wvmheyrle KHN21567.1 102 IGMKKTLVFYMGRAPRGEKSNWVMHEYRLE 131 ****************************85 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 4.71E-63 | 3 | 150 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 59.603 | 5 | 150 | IPR003441 | NAC domain |
Pfam | PF02365 | 6.3E-29 | 6 | 130 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 366 aa Download sequence Send to blast |
MEEKLPPGFR FHPTDEELIT YYLLRKVSDI SFTSKAVAVV DFNKSEPWDL PGKASMGEKE 60 WYFFSLKDRK YPTGLRTNRA TESGYWKTTG KDKEIFGGGV LIGMKKTLVF YMGRAPRGEK 120 SNWVMHEYRL ENKQPYSSKE EWVICRVFQK SSAPKKPQQT SSSQPSQESP ISMVNEFGDV 180 DLPNLNSIAN SSSSFTNNIA YNGDHPSNVN TNNMNLTMNW PSSTELVPSL PWPSGLLNPN 240 LSVNSLLLKA LQLRNTYQQR ETTTSTSDHH FATYVPQGFS HHNIGTDKHH FPPNLSASSS 300 SKALESCVPQ QEQPFNMDSI WPFQSRMESL YYTWGQNYRK LVDYCQRLSS SILIRKISFA 360 GTQQQN |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 1e-55 | 5 | 156 | 17 | 171 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 1e-55 | 5 | 156 | 17 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 1e-55 | 5 | 156 | 17 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 1e-55 | 5 | 156 | 17 | 171 | NO APICAL MERISTEM PROTEIN |
4dul_A | 1e-55 | 5 | 156 | 17 | 171 | NAC domain-containing protein 19 |
4dul_B | 1e-55 | 5 | 156 | 17 | 171 | NAC domain-containing protein 19 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KHN21567.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_003524377.1 | 0.0 | NAC domain-containing protein 92-like | ||||
Refseq | XP_028233905.1 | 0.0 | NAC domain-containing protein 92-like | ||||
TrEMBL | A0A445KTL5 | 0.0 | A0A445KTL5_GLYSO; NAC domain-containing protein 100 | ||||
TrEMBL | I1K5R8 | 0.0 | I1K5R8_SOYBN; Uncharacterized protein | ||||
STRING | GLYMA05G35090.1 | 0.0 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF4946 | 33 | 56 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18400.1 | 2e-94 | NAC domain containing protein 58 |
Publications ? help Back to Top | |||
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