PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN18749.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bZIP
Protein Properties Length: 664aa    MW: 74706.3 Da    PI: 9.0545
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN18749.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_129.22.1e-09341403163
                 XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                 eke++r rr   NRe+Ar   +R++a +eeL++k+++L  eN+ Lk e +   +e+++l++ +
  KHN18749.1 341 EKEVRRIRRILANRESARQTIRRRQALCEELTRKAASLVVENENLKREKKLALNEYQSLETTN 403
                 799*******************************************************99876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.3E-10341405IPR004827Basic-leucine zipper domain
PfamPF001704.9E-8341403IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.151343406IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.59E-5344400No hitNo description
Gene3DG3DSA:1.20.5.1705.5E-5345401No hitNo description
CDDcd147024.05E-14346397No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 664 aa     Download sequence    Send to blast
MEVETHSLSP TFELIHLLSQ STTDTYFPPN NAANQPSLGH ATAVLKLQKV YRTRLAGWPT  60
PPLLPRRWQA IDYVRLNHST ISFFNLPETA ASCWSRVKLN AAKVGKGLSK DAIAQKCWLS  120
SIGSKLLIHD IAMDITYNTT IKNGVKQMLQ EREQYEYIVR EGKIINKQYG DLFHTNEDSE  180
DAKWIFVMST SKKLYAGKKK KGLFHHSSFL AGGTTLAAGR LVAENGILKS ISAYSGHYRP  240
TDDTLDSFLS YLKENGVKLD EVELHKANED SDIYEESNVG QAIAGQYPDE KISTTTVETE  300
MFQQDDCSRH MKVEQDADVL PNTSYSLVRS RKSRRNLTEE EKEVRRIRRI LANRESARQT  360
IRRRQALCEE LTRKAASLVV ENENLKREKK LALNEYQSLE TTNKHLKAQI AKSINTEVEK  420
TPVEPVSSVA EVTPLSGNGP WFLYNHFPVP QIFWPSILQF SNPVHLQNTS LNSFSIPPNA  480
YVPCSSESES RHKQNNLIND NRTQNPFYMF PCPWLFPLPQ FGNQQSSPSS SLKDEQDNLS  540
LGKPCSSSSS LNTMANVDYQ AALPIKLKTA ASGWTEAISI NGPGWATPRS SLDGEHEFQL  600
HSAPNNKVSS TAYIATSSLE KKQGQCICQG RNLVDAVAAA EARKRRKELT KQKSIHNRQS  660
RMHC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1642647RKRRKE
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN18749.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1871641e-128AC187164.9 Glycine max cultivar Williams 82 clone gmw2-53i18, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028225992.10.0uncharacterized protein LOC114407185 isoform X1
TrEMBLA0A445LE810.0A0A445LE81_GLYSO; Uncharacterized protein
STRINGGLYMA03G35101.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF64002834
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19490.12e-40bZIP family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]