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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
KHN15689.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
|
| Family |
MIKC_MADS |
| Protein Properties |
Length: 200aa MW: 23204.3 Da PI: 9.5442 |
| Description |
MIKC_MADS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| KHN15689.1 | genome | TCUHK | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | SRF-TF | 90.1 | 1.2e-28 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
k+ie+++ rqv fskRr g+lKKA+ELSvLCdaevavi+fs++g+lye+ss
KHN15689.1 9 KKIEDTTSRQVAFSKRRSGLLKKAYELSVLCDAEVAVIVFSQNGRLYEFSS 59
68***********************************************96 PP
|
| 2 | K-box | 62 | 2.3e-21 | 84 | 164 | 12 | 92 |
K-box 12 akaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenk 92
++l+ ++ + k+ie L++++R+llG++++s+s+ eL+ +e+qL +sl+++R++K++l++eqi++l+ + +++++ +
KHN15689.1 84 DYIQQLKLDSVSMTKKIELLEHSKRKLLGQSVSSCSFDELKGIEEQLRTSLQRVRQRKTQLYTEQIDRLRSQYQRAERSSQ 164
556888999999**********************************************************99998887655 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0046983 | Molecular Function | protein dimerization activity |
| Sequence ? help Back to Top |
| Protein Sequence Length: 200 aa
Download sequence Send
to blast |
MVRGKVQLKK IEDTTSRQVA FSKRRSGLLK KAYELSVLCD AEVAVIVFSQ NGRLYEFSSS 60
DMTKILERYR EYTKDVPGSK FGDDYIQQLK LDSVSMTKKI ELLEHSKRKL LGQSVSSCSF 120
DELKGIEEQL RTSLQRVRQR KTQLYTEQID RLRSQYQRAE RSSQQQWPRH TQAEAEPHCS 180
SSQSLDVDTE LFIGLPKQQC
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | MADS-box transcription factor that acts with AGL71 and AGL72 in the control of flowering time. Promotes flowering at the shoot apical and axillary meristems. Seems to act through a gibberellin-dependent pathway. Interacts genetically with SOC1 and its expression is directly regulated by SOC1 (PubMed:21609362). Plays a role in controlling flower organ senescence and abscission by repressing ethylene responses and regulating the expression of BOP2 and IDA (PubMed:21689171). {ECO:0000269|PubMed:21609362, ECO:0000269|PubMed:21689171}. |
