 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
KHN13480.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 320aa MW: 36745.8 Da PI: 4.5222 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| KHN13480.1 | genome | TCUHK | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 56.7 | 4.1e-18 | 81 | 134 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
k++++t++q++ Le+ Fe ++++ e++ +LAk+lg++ rqV +WFqNrRa+ k
KHN13480.1 81 KKRRLTSKQVQFLESNFEVENKLEPERKVQLAKELGMQPRQVAIWFQNRRARFK 134
56689***********************************************98 PP
|
| 2 | HD-ZIP_I/II | 126.9 | 8.9e-41 | 81 | 172 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93
kkrrl+++qv++LE++Fe e+kLeperKv+la+eLg+qprqva+WFqnrRAR+ktkqlEkdy +Lk++yd lk++ ++L +e ++L+ee+++
KHN13480.1 81 KKRRLTSKQVQFLESNFEVENKLEPERKVQLAKELGMQPRQVAIWFQNRRARFKTKQLEKDYGVLKASYDVLKRDYDNLLQESDKLKEEVNS 172
9**************************************************************************************99975 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 320 aa
Download sequence Send
to blast |
MAGEKLHEGS SMTLLLQKER LTCSPELIRS FWVQNSESSF QGSKSLANVV NVTQRPFFQG 60
LEKEENGEDE DFGVCLNQPG KKRRLTSKQV QFLESNFEVE NKLEPERKVQ LAKELGMQPR 120
QVAIWFQNRR ARFKTKQLEK DYGVLKASYD VLKRDYDNLL QESDKLKEEV NSLKTRLIPR 180
EQEEQNLDDT SCDAVNSQHK EQRDLITNTV SENGSKVPLP VMVTSKQEDA NSAKSDVLDS 240
DSPHFTDGNQ FSLMEPADSS HAVEPDHSAF SQDEEDILSQ NILTMPFLPK VEDVCYDEPH 300
EDSCSFRFPV EDQTFCFWSY
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 128 | 136 | RRARFKTKQ |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015034 | 1e-110 | AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari. |
