PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN08429.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family G2-like
Protein Properties Length: 373aa    MW: 42321.3 Da    PI: 8.7005
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN08429.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like986.6e-3187140255
     G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                 prlrWtpeLH++F +ave+LGG+e+AtPk +l+lm+v gL+++hvkSHLQ+YR+
  KHN08429.1  87 PRLRWTPELHHSFAHAVERLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRS 140
                 8****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129411.14283143IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.9E-2983141IPR009057Homeodomain-like
SuperFamilySSF466891.7E-1485141IPR009057Homeodomain-like
TIGRFAMsTIGR015575.6E-2287142IPR006447Myb domain, plants
PfamPF002492.8E-988139IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 373 aa     Download sequence    Send to blast
MSEGYEIHNN EETSSGCSQK CSSFDLNEEL ACSTEDNTDT KECYELTTTN EKAKDEGTSA  60
NGSSISSREG NERRGTTVRQ YVRSKMPRLR WTPELHHSFA HAVERLGGQE RATPKLVLQL  120
MNVRGLSIAH VKSHLQMYRS KKLDEAGQVL SQTYRSNQEV VRRPLILHQS ISPQQHLKMG  180
NGGIILASNF NKHSHFPSLL QPSFSLSRSL TNDTDSRHQH WYINHQAFRI PIASGQIQPK  240
DTRGRIAPMR PSQLLEEKRW PPLEILNNHQ SKFQKLPSID SPKIGSQAIQ PAEWSSFMNN  300
TSIIDYLSNN SNEPRNNSNS LKLEFGPPFR IKKDEQQFLD LQLGLSHTCT VGTDGKMDHY  360
RETPEISTKL SLS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A5e-1888142458Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B5e-1888142458Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A5e-1888142357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B5e-1888142357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C5e-1888142357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D5e-1888142357Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A5e-1888142458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C5e-1888142458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D5e-1888142458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F5e-1888142458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H5e-1888142458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J5e-1888142458Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN08429.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014621273.10.0uncharacterized protein LOC102669757
RefseqXP_028188238.10.0uncharacterized protein LOC114374764
TrEMBLA0A445I8L80.0A0A445I8L8_GLYSO; Putative Myb family transcription factor
TrEMBLK7M1B40.0K7M1B4_SOYBN; Uncharacterized protein
STRINGGLYMA13G30154.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF30123270
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38300.12e-35G2-like family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]