 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
KHN07363.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
|
| Family |
HSF |
| Protein Properties |
Length: 231aa MW: 26714.2 Da PI: 8.8961 |
| Description |
HSF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| KHN07363.1 | genome | TCUHK | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HSF_DNA-bind | 108.1 | 6.7e-34 | 21 | 112 | 2 | 102 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98
Fl k+y +++d+++++++sw+++g++fvv+++ efa+++Lp+ Fkhsnf+SFvRQLn+YgF+k+ +++ weF ++ Fkkg++ell++i+
KHN07363.1 21 FLLKTYMLVDDPATDDVVSWNSEGTAFVVWQPAEFARDLLPTLFKHSNFSSFVRQLNTYGFRKIATSR---------WEFFNDRFKKGERELLHEIR 108
9****************************************************************999.........******************** PP
XXXX CS
HSF_DNA-bind 99 rkks 102
r+k
KHN07363.1 109 RRKA 112
*985 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 231 aa
Download sequence Send
to blast |
MEGTSEKGLW ECGRKCTPPP FLLKTYMLVD DPATDDVVSW NSEGTAFVVW QPAEFARDLL 60
PTLFKHSNFS SFVRQLNTYG FRKIATSRWE FFNDRFKKGE RELLHEIRRR KAWTSKQQPK 120
APNQATLQDS DEDQRSSSIS SSSGYTTLVD ENKRLKKENG VLNSELTSMK RKCKELLDLV 180
AKYSSHAKEE KEDERPMLFG VRLDVQGERE MKRHRAEMSE SASIMLSQSC K
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 2ldu_A | 3e-20 | 19 | 110 | 18 | 120 | Heat shock factor protein 1 |
| 5d5u_B | 3e-20 | 19 | 110 | 27 | 129 | Heat shock factor protein 1 |
| 5d5v_B | 3e-20 | 19 | 110 | 27 | 129 | Heat shock factor protein 1 |
| 5d5v_D | 3e-20 | 19 | 110 | 27 | 129 | Heat shock factor protein 1 |
| Search in ModeBase |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcriptional regulator that specifically binds DNA sequence 5'-AGAAnnTTCT-3' known as heat shock promoter elements (HSE). |
