PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KHN06404.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | G2-like | ||||||||
Protein Properties | Length: 401aa MW: 45847.8 Da PI: 9.0064 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 100.3 | 1.3e-31 | 82 | 135 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtpeLH +Fv+ave+LGG+e+AtPk +l+lm+v gL+++hvkSHLQ+YR+ KHN06404.1 82 PRLRWTPELHLSFVHAVERLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRS 135 8****************************************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 12.218 | 78 | 138 | IPR017930 | Myb domain |
Gene3D | G3DSA:1.10.10.60 | 7.7E-30 | 78 | 136 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 8.6E-15 | 80 | 136 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 1.7E-22 | 82 | 137 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 3.0E-9 | 83 | 134 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 401 aa Download sequence Send to blast |
MSDEYERSEH ADDDSSMGSS QKCSSFDLNE EASSKDNNDN DDKGFEEARE EGTSTNKSSS 60 MTKEGSNERR GGVRQYVRSK MPRLRWTPEL HLSFVHAVER LGGQERATPK LVLQLMNVRG 120 LSIAHVKSHL QMYRSKKLDE AGQVLGQTYK STHELGRISH VAHQSMNPRQ HFKMGNGGII 180 LASDYNDHSY FHGLMHPCSL SHSHTKAIDS RRQQWYFNNH QPFRRPSYFS NEVVSSTALQ 240 TQGRSLSSNQ INLMDATSIA PMRPSQFLEE KKWPPLDIMN NHHWKKRLPA NITSNAVSQP 300 VVHQFGTTAA SLLRPSELNF GNNTRIKEHL SNSDEHRNYS NSFKLEFEPP FRIKSNQEKL 360 QKENQWAPDL RLSLSQRDGN NDGKTDHCRE TQEINTKLSL S |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4r_A | 8e-18 | 83 | 137 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 8e-18 | 83 | 137 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 8e-18 | 83 | 137 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 8e-18 | 83 | 137 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KHN06404.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_028232862.1 | 0.0 | two-component response regulator ORR24-like | ||||
TrEMBL | A0A445KPI0 | 0.0 | A0A445KPI0_GLYSO; Putative Myb family transcription factor | ||||
STRING | GLYMA05G29161.1 | 0.0 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF3012 | 32 | 70 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G38300.1 | 4e-37 | G2-like family protein |
Publications ? help Back to Top | |||
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