PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KHN06293.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | WRKY | ||||||||
Protein Properties | Length: 368aa MW: 41319.5 Da PI: 5.3059 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 91.2 | 8e-29 | 129 | 190 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK++ g++fpr+YYrCt++ gC ++k+v++s+edp ++eitY+g+H+++ KHN06293.1 129 LDDGYSWRKYGQKDILGAKFPRGYYRCTYRnvqGCLATKQVQKSDEDPMICEITYKGRHTCT 190 59***************************98989**************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 5.8E-28 | 123 | 191 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 22.791 | 124 | 187 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 8.37E-25 | 127 | 191 | IPR003657 | WRKY domain |
SMART | SM00774 | 6.6E-40 | 129 | 191 | IPR003657 | WRKY domain |
Pfam | PF03106 | 6.3E-26 | 130 | 189 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 368 aa Download sequence Send to blast |
MEENFKCEQV GLIDELMQGK ELAKQLCDHL LVSSSSSSSH ETNEVLIEKI LSTYEKALAM 60 LNCKADVGES KAKNGSMMDS HCPLTNGSPK SEVLEPEVKN KNVFKKRKTM SKLTEQVKVR 120 LGTAHEGSLD DGYSWRKYGQ KDILGAKFPR GYYRCTYRNV QGCLATKQVQ KSDEDPMICE 180 ITYKGRHTCT QASHLNKTVA PPSKRKVNFL GANKHQTHQI KNQIQQEKIE QPPETFFTFG 240 SSGLEVKIED MDHKEDMFPS FCFSSPLKEG SENGDNNSLF SYTMMENNLM ENFSPTFISP 300 TSSDIESNIF YHWGSTGIGQ SVQSSESDIT DIVSAPTSVT NSPIMDLDFF DKIDFDTDFP 360 LIPPELCT |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5w3x_B | 4e-19 | 128 | 187 | 13 | 74 | Disease resistance protein RRS1 |
5w3x_D | 4e-19 | 128 | 187 | 13 | 74 | Disease resistance protein RRS1 |
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Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KHN06293.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | KT031234 | 0.0 | KT031234.1 Glycine max clone HN_CCL_106 WRKY transcription factor (Glyma07g06320.1) mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_028239417.1 | 0.0 | probable WRKY transcription factor 46 | ||||
TrEMBL | A0A445JSZ8 | 0.0 | A0A445JSZ8_GLYSO; Putative WRKY transcription factor 41 | ||||
STRING | GLYMA07G06320.1 | 0.0 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF493 | 34 | 157 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G11070.1 | 1e-44 | WRKY family protein |
Publications ? help Back to Top | |||
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