PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KHN05583.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | bZIP | ||||||||
Protein Properties | Length: 456aa MW: 50993.9 Da PI: 6.5117 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 30.7 | 6.7e-10 | 167 | 207 | 3 | 40 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLee...kvkeLea 40 + k rr+++NReAAr+sR+RKka++++Le+ + ++Le+ KHN05583.1 167 DQKTVRRLAQNREAARKSRLRKKAYVQQLETsrvRLAQLEQ 207 568889***********************973224444444 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 3.8E-6 | 165 | 228 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.266 | 167 | 211 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 5.1E-7 | 168 | 208 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14708 | 1.56E-20 | 169 | 221 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 7.8E-8 | 169 | 213 | No hit | No description |
SuperFamily | SSF57959 | 1.29E-6 | 169 | 212 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 172 | 187 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 9.1E-30 | 254 | 328 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 456 aa Download sequence Send to blast |
MQSFNTTESE STSPLYSHSP FYHRGNDPSR NPTRFSDLQH SFRQHDAVDL SSSSVFGAKS 60 SNVAVVASNL QCGTFNTNLG CAEFGSIEQR GMFQRGTNSA TTVSMGNRHV ENWAEDSQHT 120 EDTCTDIDTD DKNQCFSTVS WCNGVGDGAL VVVDSQDQSK TKVKAEDQKT VRRLAQNREA 180 ARKSRLRKKA YVQQLETSRV RLAQLEQELQ RARQQGAFIA TGNQGDRSHS AVGNGALAFD 240 MDYARWFDEH QRLINDIRSA INSQMDENEL HLLVDGVMAH YDELFRLKSI GAKADVFHIL 300 SGMWKTPAER CFIWLGGFRS SELLKIVRNQ LEPLTEQQLM GIYNLQQSSQ QAEDALSQGM 360 DALQQSLSET LSSSSLGPSG SGNVAEYMGQ MAIALGKLAT LENFLHQADL LRQQTLQQMR 420 RILTTFQAAR ALLVINDYVS RLRALNSLWL ACPREY |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KHN05583.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AC235473 | 1e-119 | AC235473.1 Glycine max strain Williams 82 clone GM_WBc0110I22, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_003536694.1 | 0.0 | transcription factor TGA2.2 | ||||
Refseq | XP_028182652.1 | 0.0 | transcription factor TGA2.2-like | ||||
Swissprot | Q41558 | 1e-163 | HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment) | ||||
TrEMBL | A0A0B2PD41 | 0.0 | A0A0B2PD41_GLYSO; Transcription factor HBP-1b(C1) | ||||
TrEMBL | I1LEY4 | 0.0 | I1LEY4_SOYBN; Uncharacterized protein | ||||
STRING | GLYMA10G42280.1 | 0.0 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF6022 | 31 | 49 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68640.1 | 1e-130 | bZIP family protein |
Publications ? help Back to Top | |||
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