PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja

Family

bZIP

Protein Properties

Length: 362aa MW: 41008.6 Da PI: 6.7304

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
KHN04815.1	genome	TCUHK	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	33.9	7.1e-11	76	109	3	36
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvk 36 +k +rr+++NReAAr+sR+RKka++++Le KHN04815.1 76 TDKIQRRLAQNREAARKSRLRKKAYVQQLESSRL 109 7899*************************97544 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	5.9E-8	69	120	No hit	No description
SMART	SM00338	9.2E-7	74	134	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	9.7E-8	76	112	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.094	76	120	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	3.5E-7	78	120	No hit	No description
CDD	cd14708	5.03E-22	78	130	No hit	No description
PROSITE pattern	PS00036	0	81	96	IPR004827	Basic-leucine zipper domain
Pfam	PF14144	8.6E-32	164	238	IPR025422	Transcription factor TGA like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0009409	Biological Process	response to cold
GO:0042742	Biological Process	defense response to bacterium
GO:0005634	Cellular Component	nucleus
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 362 aa Download sequence Send to blast
MNSASPQFVS PRSMSVYDPI HQISMWGEGF KSNGNLSAAM PLIDEADMKF DSQSEDASHG 60 ILGEPNKYDQ EASKPTDKIQ RRLAQNREAA RKSRLRKKAY VQQLESSRLK LMQLEQELER 120 ARQQGMYIGG GLDSNHLGFA GSVNSGITTF EMEYGHWVNE QNRQITELRN ALNAHIGDVE 180 LRILVDGMMS HYAEMFRMKS AAAKADVFYV MSGMWKTTAE RFFLWIGGFH PSELLKVLGP 240 LIEPLTEQQR LNIYNLGQSC QQAEDALSQG MDKLRQTLAD SVAAGQFMEG TYIPQMTSAM 300 EKLEDLVSFV KQADHLRQET LEQMSRILTI RQAARCLLAL GEYFQRLRAL SSLWSNRPRE 360 PA

Sequence ? help Back to Top

Protein Sequence Length: 362 aa Download sequence Send to blast

MNSASPQFVS PRSMSVYDPI HQISMWGEGF KSNGNLSAAM PLIDEADMKF DSQSEDASHG  60
ILGEPNKYDQ EASKPTDKIQ RRLAQNREAA RKSRLRKKAY VQQLESSRLK LMQLEQELER  120
ARQQGMYIGG GLDSNHLGFA GSVNSGITTF EMEYGHWVNE QNRQITELRN ALNAHIGDVE  180
LRILVDGMMS HYAEMFRMKS AAAKADVFYV MSGMWKTTAE RFFLWIGGFH PSELLKVLGP  240
LIEPLTEQQR LNIYNLGQSC QQAEDALSQG MDKLRQTLAD SVAAGQFMEG TYIPQMTSAM  300
EKLEDLVSFV KQADHLRQET LEQMSRILTI RQAARCLLAL GEYFQRLRAL SSLWSNRPRE  360
PA

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00502	DAP	Transfer from AT5G10030	Download

Cis-element ? help Back to Top
Source	Link
PlantRegMap	KHN04815.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	SOYSTGA	0.0	L28005.1 Glycine max TGACG-motif binding protein (STGA1) mRNA, complete cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	NP_001238287.2	0.0	bZIP transcription factor bZIP52
Refseq	XP_028195719.1	0.0	transcription factor TGA4-like isoform X2
Swissprot	Q39162	0.0	TGA4_ARATH; Transcription factor TGA4
TrEMBL	A0A0B2P695	0.0	A0A0B2P695_GLYSO; Transcription factor TGA4
TrEMBL	A0A0R0HL80	0.0	A0A0R0HL80_SOYBN; Uncharacterized protein
STRING	GLYMA11G36010.4	0.0	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF1096	34	104

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G10030.2	1e-178	TGACG motif-binding factor 4

Publications ? help Back to Top
Duarte JM, et al. Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. Mol. Biol. Evol., 2006. 23(2): p. 469-78 [PMID:16280546] Qi X, et al. Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing. Nat Commun, 2014. 5: p. 4340 [PMID:25004933] Canales J,Contreras-López O,Álvarez JM,Gutiérrez RA Nitrate induction of root hair density is mediated by TGA1/TGA4 and CPC transcription factors in Arabidopsis thaliana. Plant J., 2017. 92(2): p. 305-316 [PMID:28771873]