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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
KHN04680.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
TALE |
Protein Properties |
Length: 609aa MW: 66885.9 Da PI: 7.0079 |
Description |
TALE family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
KHN04680.1 | genome | TCUHK | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 28.9 | 1.9e-09 | 408 | 445 | 19 | 54 |
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54
Fe ++yp+ +++ LAk++gL+ +qV++WF N R +
KHN04680.1 408 FEHflHPYPTDTDKLMLAKQTGLSRSQVSNWFINARVR 445
554459******************************88 PP
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2 | BELL | 103.4 | 1.6e-33 | 282 | 348 | 6 | 72 |
BELL 6 qkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72
+kk++Ll++l+eV++rY+qy++q+q+v+ sFe v gl +a+pY+slA ka+S+hFrcLk+ai++qi
KHN04680.1 282 GRKKSRLLTMLDEVYRRYRQYYQQMQAVVTSFEYVSGLSNAAPYASLAIKAMSKHFRCLKNAITDQI 348
68****************************************************************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 609 aa
Download sequence Send
to blast |
MAEGFEAYHV PQQSRRDKLR VVATQNQHGL VEPSSLLPLY DPSSFISSDL LTSFHNGQKH 60 NLGCGMKEER ANLMMGFAAA AGGGGVMNNG SSSSCCSSNS SSVSYLDPES SLPLNQATIQ 120 VINNSNNNNM FLYQAQNLRE FDQGYNNNNN NNSEIMVFKP EPLSLSLSSH NNGVNLQRYG 180 SVVYGDKVGG VGGGGGGGVV IYGGSGLNEV SRCTVPMGPF TGYASILKGS RFLKPAQQLL 240 EELCDVGGVC AEKIVADASL MEPIPPESSS EDPLGDHGGD QGRKKSRLLT MLDEVYRRYR 300 QYYQQMQAVV TSFEYVSGLS NAAPYASLAI KAMSKHFRCL KNAITDQIQF ANKAHFHISN 360 RKDESPRFGN SDRGPYGQRP GFLEHQPVWR PQRGLPERAV TVLRAWLFEH FLHPYPTDTD 420 KLMLAKQTGL SRSQVSNWFI NARVRLWKPM VEEIHMLETR QAPKNLQKEE HCTNKPSDHL 480 PSDNSIVSEN PSTSTDKFQE APYKRAINEL PNIPVRTQEQ LNLPCTSNQP GGVGVSMGGS 540 ASNSVSLTLG LYQNHGIGLA EPFPLNAAQR FGVALETNNE GYVMSDYESQ NRHFGRDVIG 600 GQLLHDFVG
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that is involved in the preservation of the spiral phyllotactic arrangement leading to a regular pattern of organ initiation. Required for maintenance of stem cell fate in the shoot apical meristem, and is essential for specifying floral primordia and establishing early internode patterning events during inflorescence development. Acts as transcription repressor of AG expression in floral and inflorescence meristems. Is also responsive of the nuclear import of SHOOT MERISTEMLESS (STM). In the fruit, plays a central role in patterning by negatively regulating SHP expression in order to prevent replum cells from adopting a valve margin cell fate. {ECO:0000269|PubMed:12874117, ECO:0000269|PubMed:12897247, ECO:0000269|PubMed:13678595, ECO:0000269|PubMed:15019989, ECO:0000269|PubMed:15120075, ECO:0000269|PubMed:15155890, ECO:0000269|PubMed:16741748}. |
Publications
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- Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] - Qi X, et al.
Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing. Nat Commun, 2014. 5: p. 4340 [PMID:25004933] - Pabón-Mora N,Wong GK,Ambrose BA
Evolution of fruit development genes in flowering plants. Front Plant Sci, 2014. 5: p. 300 [PMID:25018763] - Khan M, et al.
Repression of Lateral Organ Boundary Genes by PENNYWISE and POUND-FOOLISH Is Essential for Meristem Maintenance and Flowering in Arabidopsis. Plant Physiol., 2015. 169(3): p. 2166-86 [PMID:26417006] - Andrés F, et al.
Floral Induction in Arabidopsis by FLOWERING LOCUS T Requires Direct Repression of BLADE-ON-PETIOLE Genes by the Homeodomain Protein PENNYWISE. Plant Physiol., 2015. 169(3): p. 2187-99 [PMID:26417007] - Bencivenga S,Serrano-Mislata A,Bush M,Fox S,Sablowski R
Control of Oriented Tissue Growth through Repression of Organ Boundary Genes Promotes Stem Morphogenesis. Dev. Cell, 2016. 39(2): p. 198-208 [PMID:27666746] - Sehra B,Franks RG
Redundant CArG Box Cis-motif Activity Mediates SHATTERPROOF2 Transcriptional Regulation during Arabidopsis thaliana Gynoecium Development. Front Plant Sci, 2017. 8: p. 1712 [PMID:29085379] - Simonini S,Stephenson P,Østergaard L
A molecular framework controlling style morphology in Brassicaceae. Development, 2018. [PMID:29440299]
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